RNA–Protein interactions for RNA: ENST00000262043.7

PHF3-201, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHF3, Length 8,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-201ENST00000262043 SETDB2Q96T68 719 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 LRRC27Q9C0I9 530 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 PBRM1Q86U86 1689 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 F8W031 263 aaPredicted RBP11.71□□□□□ -0.54
PHF3-201ENST00000262043 CAVIN2O95810 425 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 RRAGBQ5VZM2 374 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 CNNM2Q9H8M5 875 aa11.71□□□□□ -0.54
PHF3-201ENST00000262043 NBPF7P0C2Y1 421 aaPredicted RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 CCDC174Q6PII3 467 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 ESR2Q92731 530 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 IFI16Q16666 785 aaKnown RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 ADGBQ8N7X0 1667 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 CHST3Q7LGC8 479 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 ZFYP08048 801 aaPredicted RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 ZCRB1Q8TBF4 217 aaKnown RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 CTAGE1Q96RT6 745 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 KDM5AP29375 1690 aaKnown RBP11.7□□□□□ -0.54
PHF3-201ENST00000262043 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 ATP2B3Q16720 1220 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 C8orf58Q8NAV2 365 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 TRERF1Q96PN7 1200 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 PSMD1Q99460 953 aa11.7□□□□□ -0.54
PHF3-201ENST00000262043 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.7□□□□□ -0.543e-8■□□□□ 10.3
PHF3-201ENST00000262043 DNM1Q05193 864 aaKnown RBP11.69□□□□□ -0.54
PHF3-201ENST00000262043 ZGPATQ8N5A5 531 aaKnown RBP11.69□□□□□ -0.54
PHF3-201ENST00000262043 FSD2A1L4K1 749 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 HSF2BPO75031 334 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 GTF2F1P35269 517 aaKnown RBP eCLIP11.69□□□□□ -0.542e-6■■■□□ 17.2
PHF3-201ENST00000262043 LMAN1P49257 510 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
PHF3-201ENST00000262043 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 PAG1Q9NWQ8 432 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 PICALMQ13492 652 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 TMTC2Q8N394 836 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 PTGS1P23219 599 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 EHBP1Q8NDI1 1231 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 CCDC171Q6TFL3 1326 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 TICAM2Q86XR7 235 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 ARHGAP45Q92619 1136 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 ZFP91Q96JP5 570 aaPredicted RBP11.69□□□□□ -0.54
PHF3-201ENST00000262043 COMMD10Q9Y6G5 202 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 SYNCQ9H7C4 482 aa11.69□□□□□ -0.54
PHF3-201ENST00000262043 URB2Q14146 1524 aaKnown RBP11.69□□□□□ -0.54
PHF3-201ENST00000262043 AOPEPQ8N6M6 819 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 CALCOCO1Q9P1Z2 691 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 ERMNQ8TAM6 284 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 HOMER2Q9NSB8 354 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 RNF216Q9NWF9 866 aaPredicted RBP11.68□□□□□ -0.54
PHF3-201ENST00000262043 PA2G4Q9UQ80 394 aaKnown RBP11.68□□□□□ -0.54
PHF3-201ENST00000262043 MSH6P52701 1360 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 SLC9C2Q5TAH2 1124 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 NAA16Q6N069 864 aaPredicted RBP11.68□□□□□ -0.54
PHF3-201ENST00000262043 MAPKBP1O60336 1514 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 NMIQ13287 307 aaPredicted RBP11.68□□□□□ -0.54
PHF3-201ENST00000262043 MAGEB6P1A0A0J9YX57 407 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 ANKRD44Q8N8A2 993 aa11.68□□□□□ -0.54
PHF3-201ENST00000262043 RTL1A6NKG5 1358 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 DYNC1I1O14576 645 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 KIAA0753Q2KHM9 967 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 NAPAP54920 295 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 MAGEB6Q8N7X4 407 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CEP63Q96MT8 703 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 FAM107BQ9H098 131 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 TNRQ92752 1358 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 AKR1B10O60218 316 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CALM1P0DP23 149 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CALM2P0DP24 149 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CALM3P0DP25 149 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 IKBKGQ9Y6K9 419 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CADPS2Q86UW7 1296 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
PHF3-201ENST00000262043 A0A1W2PRG0 241 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CKAP4Q07065 602 aaKnown RBP11.67□□□□□ -0.54
PHF3-201ENST00000262043 LMBR1LQ6UX01 489 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 DACT1Q9NYF0 836 aa11.67□□□□□ -0.54
PHF3-201ENST00000262043 CYLC1P35663 651 aaPredicted RBP11.66□□□□□ -0.54
PHF3-201ENST00000262043 ARID5AQ03989 594 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 SKILP12757 684 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 ATP8B2P98198 1209 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 KSR2Q6VAB6 950 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 MRPS27Q92552 414 aaKnown RBP11.66□□□□□ -0.54
PHF3-201ENST00000262043 FERMT1Q9BQL6 677 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 SELENOOQ9BVL4 669 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 NIP7Q9Y221 180 aaKnown RBP eCLIP11.66□□□□□ -0.54
PHF3-201ENST00000262043 KIF1BO60333 1816 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 CTAGE9A4FU28 777 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 AKAP4Q5JQC9 854 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 CEP112Q8N8E3 955 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 PRAG1Q86YV5 1406 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 F13A1P00488 732 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 GIGYF2Q6Y7W6 1299 aaKnown RBP11.66□□□□□ -0.54
PHF3-201ENST00000262043 ZNF608Q9ULD9 1512 aaPredicted RBP11.66□□□□□ -0.54
PHF3-201ENST00000262043 BMP15O95972 392 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 NFATC2IPQ8NCF5 419 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 BBXQ8WY36 941 aaPredicted RBP11.66□□□□□ -0.54
PHF3-201ENST00000262043 DHX58Q96C10 678 aa11.66□□□□□ -0.54
PHF3-201ENST00000262043 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms