RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 GUCA1BQ9UMX6 200 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 GJA3Q9Y6H8 435 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 FYCO1Q9BQS8 1478 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 AMPD3Q01432 767 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 CEP85LQ5SZL2 805 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.45
SLC6A4-201ENST00000261707 DNM1Q05193 864 aaKnown RBP12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 MRPS27Q92552 414 aaKnown RBP12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 KCNK9Q9NPC2 374 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 KRT13P13646 458 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 TMEM266Q2M3C6 531 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 CERS3Q8IU89 383 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 RPUSD2Q8IZ73 545 aaKnown RBP12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 UTP14AQ9BVJ6 771 aaKnown RBP12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 RMND1Q9NWS8 449 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 ANKRD50Q9ULJ7 1429 aa12.21□□□□□ -0.46
SLC6A4-201ENST00000261707 A6NNZ2 444 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 PLS1Q14651 629 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 TUBB8Q3ZCM7 444 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 STK32BQ9NY57 414 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 IDH1O75874 414 aaKnown RBP12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 IFNKQ9P0W0 207 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 RPGRIP1LQ68CZ1 1315 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 ZNF853P0CG23 659 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 TCHPQ9BT92 498 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 WIZO95785 1651 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 VIMP08670 466 aaKnown RBP12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 HPDP32754 393 aaPredicted RBP12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 KIF5AQ12840 1032 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 UBLCP1Q8WVY7 318 aaPredicted RBP12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 TFCP2L1Q9NZI6 479 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 SEPT14Q6ZU15 432 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 RABEP2Q9H5N1 569 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 CEP126Q9P2H0 1117 aa12.2□□□□□ -0.46
SLC6A4-201ENST00000261707 SPTY2D1Q68D10 685 aaPredicted RBP12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 BCL2L12Q9HB09 334 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 TCERG1LQ5VWI1 586 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 C17orf53Q8N3J3 647 aaPredicted RBP12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC82Q8N4S0 544 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 PTCD1O75127 700 aaKnown RBP12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 NUCB1Q02818 461 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 DUSP27Q5VZP5 1158 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 KCNG4Q8TDN1 519 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 SLC12A5Q9H2X9 1139 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 NFE2L2Q16236 605 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 OGFOD1Q8N543 542 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 NECAB1Q8N987 351 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 MRVI1Q9Y6F6 885 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 RTL1A6NKG5 1358 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 PRC1O43663 620 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 TRIM27P14373 513 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 NLRP5P59047 1200 aa12.19□□□□□ -0.46
SLC6A4-201ENST00000261707 FCHSD2O94868 740 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 TPD52P55327 224 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 WHAMMP3Q1A5X7 153 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 SPAG1Q07617 926 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 NEDD9Q14511 834 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 RAB3IL1Q8TBN0 382 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 EVI5LQ96CN4 794 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 PLVAPQ9BX97 442 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 VCX3BQ9H321 246 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 ZNF213O14771 459 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 CEP128Q6ZU80 1094 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC117Q8IWD4 279 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 CALML4Q96GE6 196 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 CETN1Q12798 172 aa12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 PDE1CQ14123 709 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 SPOUT1Q5T280 376 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 UTP14CQ5TAP6 766 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 TRMT1LQ7Z2T5 733 aaKnown RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 ZNF644Q9H582 1327 aaPredicted RBP12.18□□□□□ -0.46
SLC6A4-201ENST00000261707 BTBD11A6QL63 1104 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC38Q502W7 563 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 NEK1Q96PY6 1258 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC194A0A1B0GVG4 234 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 CASQ2O14958 399 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 CARD6Q9BX69 1037 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 AFMP43652 599 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 KIF22Q14807 665 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 A0A087WZG4 1122 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 PRPHP41219 470 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 PSMC4P43686 418 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 BAG1Q99933 345 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 CCDC63Q8NA47 563 aa12.17□□□□□ -0.46
SLC6A4-201ENST00000261707 MICAL1Q8TDZ2 1067 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms