RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 RAD50Q92878 1312 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 MYL10Q9BUA6 226 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 DDX21Q9NR30 783 aaKnown RBP eCLIP17.59■□□□□ 0.41
RIPK1-201ENST00000259808 A0A0D9SFI3 127 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 LIG1P18858 919 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 ZNF445P59923 1031 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 GNG11P61952 73 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 TTC41PQ6P2S7 1318 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 SSRP1Q08945 709 aaKnown RBP17.59■□□□□ 0.41
RIPK1-201ENST00000259808 ZNF790Q6PG37 636 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 TMCO3Q6UWJ1 677 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 IP6K1Q92551 441 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
RIPK1-201ENST00000259808 PRR36Q9H6K5 1346 aa17.58■□□□□ 0.41
RIPK1-201ENST00000259808 MRPS27Q92552 414 aaKnown RBP17.58■□□□□ 0.41
RIPK1-201ENST00000259808 HSPA4P34932 840 aa17.58■□□□□ 0.41
RIPK1-201ENST00000259808 UBASH3AP57075 661 aa17.58■□□□□ 0.41
RIPK1-201ENST00000259808 IFNKQ9P0W0 207 aa17.58■□□□□ 0.41
RIPK1-201ENST00000259808 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
RIPK1-201ENST00000259808 LRMPQ12912 555 aa17.58■□□□□ 0.4
RIPK1-201ENST00000259808 UBE2Q2Q8WVN8 375 aa17.58■□□□□ 0.4
RIPK1-201ENST00000259808 TCEAL9Q9UHQ7 104 aa17.58■□□□□ 0.4
RIPK1-201ENST00000259808 EDC4Q6P2E9 1401 aaKnown RBP17.58■□□□□ 0.4
RIPK1-201ENST00000259808 ZNHIT6Q9NWK9 470 aaKnown RBP17.57■□□□□ 0.4
RIPK1-201ENST00000259808 TLR7Q9NYK1 1049 aaKnown RBP17.57■□□□□ 0.4
RIPK1-201ENST00000259808 CTAGE5O15320 804 aa17.57■□□□□ 0.4
RIPK1-201ENST00000259808 ZSCAN16Q9H4T2 348 aaPredicted RBP17.57■□□□□ 0.4
RIPK1-201ENST00000259808 MKNK2Q9HBH9 465 aa17.57■□□□□ 0.4
RIPK1-201ENST00000259808 ZCCHC11Q5TAX3 1644 aaKnown RBP17.57■□□□□ 0.4
RIPK1-201ENST00000259808 ZBTB43O43298 467 aa17.57■□□□□ 0.4
RIPK1-201ENST00000259808 ZCRB1Q8TBF4 217 aaKnown RBP17.57■□□□□ 0.4
RIPK1-201ENST00000259808 CCDC102BQ68D86 513 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 DHX32Q7L7V1 743 aaKnown RBP17.56■□□□□ 0.4
RIPK1-201ENST00000259808 SPTLC2O15270 562 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 MFSD6Q6ZSS7 791 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 GTF2F1P35269 517 aaKnown RBP eCLIP17.56■□□□□ 0.4
RIPK1-201ENST00000259808 NLRP5P59047 1200 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 GPIHBP1Q8IV16 184 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 ZSCAN29Q8IWY8 852 aaPredicted RBP17.56■□□□□ 0.4
RIPK1-201ENST00000259808 DACH1Q9UI36 760 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 TSPOAP1O95153 1857 aa17.56■□□□□ 0.4
RIPK1-201ENST00000259808 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
RIPK1-201ENST00000259808 KDM5DQ9BY66 1539 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 hCG_1642624A0A1W2PR95 340 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 FSD2A1L4K1 749 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 CCP110O43303 1012 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 RPS6KB1P23443 525 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 RBM5P52756 815 aaKnown RBP eCLIP17.55■□□□□ 0.4
RIPK1-201ENST00000259808 TPCN1Q9ULQ1 816 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 SOGA3Q5TF21 947 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 KIAA1328Q86T90 577 aa17.55■□□□□ 0.4
RIPK1-201ENST00000259808 CTCFLQ8NI51 663 aaPredicted RBP17.55■□□□□ 0.4
RIPK1-201ENST00000259808 TNNI3KQ59H18 835 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 ZFYVE27Q5T4F4 411 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 NUP88Q99567 741 aaPredicted RBP17.54■□□□□ 0.4
RIPK1-201ENST00000259808 ZNF219Q9P2Y4 722 aaPredicted RBP17.54■□□□□ 0.4
RIPK1-201ENST00000259808 FPGT-TNNI3KV9GXZ4 949 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 IL15P40933 162 aaPredicted RBP17.54■□□□□ 0.4
RIPK1-201ENST00000259808 PLIN2Q99541 437 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 CBX8Q9HC52 389 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 STX8Q9UNK0 236 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 ERBB4Q15303 1308 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 SLC5A1P13866 664 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 TAF3Q5VWG9 929 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 CCDC24Q8N4L8 307 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 TMEM2Q9UHN6 1383 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 B4E1Z4 1266 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 IQCA1Q86XH1 822 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 LEO1Q8WVC0 666 aaPredicted RBP17.54■□□□□ 0.4
RIPK1-201ENST00000259808 PRIMPOLQ96LW4 560 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 ANKIB1Q9P2G1 1089 aa17.54■□□□□ 0.4
RIPK1-201ENST00000259808 PDIA4P13667 645 aaKnown RBP17.53■□□□□ 0.4
RIPK1-201ENST00000259808 IDEP14735 1019 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 KARSQ15046 597 aaKnown RBP17.53■□□□□ 0.4
RIPK1-201ENST00000259808 PTPN21Q16825 1174 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 SYT10Q6XYQ8 523 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 SSH3Q8TE77 659 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 RIOK3O14730 519 aaKnown RBP17.53■□□□□ 0.4
RIPK1-201ENST00000259808 LARGE1O95461 756 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 PHKBQ93100 1093 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 CCDC66A2RUB6 948 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 PRDM1O75626 825 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 WASF1Q92558 559 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 SLC4A4Q9Y6R1 1079 aa17.53■□□□□ 0.4
RIPK1-201ENST00000259808 STIM1Q13586 685 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 CAVIN4Q5BKX8 364 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 TTC6Q86TZ1 520 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 CCDC12Q8WUD4 166 aaPredicted RBP17.52■□□□□ 0.4
RIPK1-201ENST00000259808 DHX58Q96C10 678 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 PREX2Q70Z35 1606 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 CYP7A1P22680 504 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 U2AF2P26368 475 aaKnown RBP eCLIP17.52■□□□□ 0.47e-7■□□□□ 8.5
RIPK1-201ENST00000259808 MATR3P43243 847 aaKnown RBP eCLIP17.52■□□□□ 0.42e-6■■■■□ 26.1
RIPK1-201ENST00000259808 SLFNL1Q499Z3 407 aa17.52■□□□□ 0.4
RIPK1-201ENST00000259808 ROBO2Q9HCK4 1378 aa17.52■□□□□ 0.39
RIPK1-201ENST00000259808 EXOC5O00471 708 aa17.52■□□□□ 0.39
RIPK1-201ENST00000259808 CASQ1P31415 396 aa17.52■□□□□ 0.39
RIPK1-201ENST00000259808 FTOQ9C0B1 505 aaKnown RBP eCLIP17.52■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms