RNA–Protein interactions for RNA: ENST00000259239.7

IMP4-201, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IMP4, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-201ENST00000259239 PDGFDQ9GZP0 370 aaPredicted RBP21.82■■□□□ 1.08
IMP4-201ENST00000259239 DBNLQ9UJU6 430 aaKnown RBP21.82■■□□□ 1.08
IMP4-201ENST00000259239 UPF1Q92900 1129 aaKnown RBP eCLIP21.81■■□□□ 1.082e-7■■■■■ 33.4
IMP4-201ENST00000259239 ECHDC1Q9NTX5 307 aa21.81■■□□□ 1.08
IMP4-201ENST00000259239 PARP3Q9Y6F1 533 aa21.81■■□□□ 1.08
IMP4-201ENST00000259239 ANKRD18AQ8IVF6 992 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
IMP4-201ENST00000259239 DBNDD2Q9BQY9 259 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 SDSP20132 328 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 TIMM10P62072 90 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 VGLL2Q8N8G2 317 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 NEUROD6Q96NK8 337 aa21.8■■□□□ 1.08
IMP4-201ENST00000259239 COL11A2P13942 1736 aaPredicted RBP21.79■■□□□ 1.08
IMP4-201ENST00000259239 MROH5Q6ZUA9 1318 aa21.79■■□□□ 1.08
IMP4-201ENST00000259239 A0A1B0GUL7 405 aa21.79■■□□□ 1.08
IMP4-201ENST00000259239 DDX46Q7L014 1031 aaKnown RBP21.78■■□□□ 1.08
IMP4-201ENST00000259239 HELBQ8NG08 1087 aaPredicted RBP21.78■■□□□ 1.08
IMP4-201ENST00000259239 AKAP2Q9Y2D5 859 aa21.78■■□□□ 1.08
IMP4-201ENST00000259239 ERC2O15083 957 aa21.77■■□□□ 1.08
IMP4-201ENST00000259239 GLRX3O76003 335 aaKnown RBP21.77■■□□□ 1.08
IMP4-201ENST00000259239 PDE8BO95263 885 aa21.77■■□□□ 1.08
IMP4-201ENST00000259239 ATP2B3Q16720 1220 aa21.77■■□□□ 1.08
IMP4-201ENST00000259239 CRY2Q49AN0 593 aa21.77■■□□□ 1.08
IMP4-201ENST00000259239 BSDC1Q9NW68 430 aaPredicted RBP21.77■■□□□ 1.08
IMP4-201ENST00000259239 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
IMP4-201ENST00000259239 TRIM6-TRIM34B2RNG4 842 aa21.76■■□□□ 1.07
IMP4-201ENST00000259239 MAP4K4O95819 1239 aaPredicted RBP21.76■■□□□ 1.07
IMP4-201ENST00000259239 RPGRQ92834 1020 aaKnown RBP21.76■■□□□ 1.07
IMP4-201ENST00000259239 RPS8P62241 208 aaKnown RBP21.75■■□□□ 1.07
IMP4-201ENST00000259239 CHRNDQ07001 517 aa21.75■■□□□ 1.07
IMP4-201ENST00000259239 CDC45O75419 566 aa21.75■■□□□ 1.07
IMP4-201ENST00000259239 TAF5LO75529 589 aa21.75■■□□□ 1.07
IMP4-201ENST00000259239 ADORA1P30542 326 aa21.75■■□□□ 1.07
IMP4-201ENST00000259239 RILPL2Q969X0 211 aa21.75■■□□□ 1.07
IMP4-201ENST00000259239 GRAPQ13588 217 aa21.74■■□□□ 1.07
IMP4-201ENST00000259239 PUM3Q15397 648 aaKnown RBP21.74■■□□□ 1.07
IMP4-201ENST00000259239 GRAPLQ8TC17 118 aaPredicted RBP21.74■■□□□ 1.07
IMP4-201ENST00000259239 XAGE2Q96GT9 111 aa21.74■■□□□ 1.07
IMP4-201ENST00000259239 BRIP1Q9BX63 1249 aa21.74■■□□□ 1.07
IMP4-201ENST00000259239 KLRG2A4D1S0 409 aaPredicted RBP21.73■■□□□ 1.07
IMP4-201ENST00000259239 SEC24BO95487 1268 aa21.73■■□□□ 1.07
IMP4-201ENST00000259239 TBC1D9Q6ZT07 1266 aa21.73■■□□□ 1.07
IMP4-201ENST00000259239 BOLA2Q9H3K6 86 aa21.73■■□□□ 1.07
IMP4-201ENST00000259239 ATP5JP18859 108 aa21.72■■□□□ 1.07
IMP4-201ENST00000259239 MINPP1Q9UNW1 487 aa21.72■■□□□ 1.07
IMP4-201ENST00000259239 SNAP23O00161 211 aa21.72■■□□□ 1.07
IMP4-201ENST00000259239 FGFR2P21802 821 aa21.72■■□□□ 1.07
IMP4-201ENST00000259239 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
IMP4-201ENST00000259239 AKAP11Q9UKA4 1901 aa21.71■■□□□ 1.07
IMP4-201ENST00000259239 GORABQ5T7V8 394 aa21.71■■□□□ 1.07
IMP4-201ENST00000259239 SLC16A10Q8TF71 515 aa21.71■■□□□ 1.07
IMP4-201ENST00000259239 CNTROBQ8N137 903 aa21.7■■□□□ 1.06
IMP4-201ENST00000259239 LPIN2Q92539 896 aa21.7■■□□□ 1.06
IMP4-201ENST00000259239 LRRC37AA6NMS7 1700 aa21.7■■□□□ 1.06
IMP4-201ENST00000259239 SLC5A1P13866 664 aa21.69■■□□□ 1.06
IMP4-201ENST00000259239 HOXA10P31260 410 aaPredicted RBP21.69■■□□□ 1.06
IMP4-201ENST00000259239 PDE6BP35913 854 aa21.69■■□□□ 1.06
IMP4-201ENST00000259239 SLC51AQ86UW1 340 aa21.69■■□□□ 1.06
IMP4-201ENST00000259239 CCDC158Q5M9N0 1113 aa21.69■■□□□ 1.06
IMP4-201ENST00000259239 RBM19Q9Y4C8 960 aaKnown RBP21.69■■□□□ 1.06
IMP4-201ENST00000259239 NDUFB9Q9Y6M9 179 aa21.69■■□□□ 1.06
IMP4-201ENST00000259239 TTC39AQ5SRH9 613 aa21.68■■□□□ 1.06
IMP4-201ENST00000259239 SRGNP10124 158 aa21.67■■□□□ 1.06
IMP4-201ENST00000259239 R3HDM1Q15032 1099 aaKnown RBP21.67■■□□□ 1.06
IMP4-201ENST00000259239 CRAMP1Q96RY5 1269 aa21.67■■□□□ 1.06
IMP4-201ENST00000259239 DNAJC2Q99543 621 aaKnown RBP21.67■■□□□ 1.06
IMP4-201ENST00000259239 IFIT1P09914 478 aaKnown RBP21.66■■□□□ 1.06
IMP4-201ENST00000259239 EVI5LQ96CN4 794 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 EDC3Q96F86 508 aaKnown RBP21.66■■□□□ 1.06
IMP4-201ENST00000259239 HAUS7Q99871 368 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 MYH13Q9UKX3 1938 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 KIF13BQ9NQT8 1826 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 WTIPA6NIX2 430 aaPredicted RBP21.66■■□□□ 1.06
IMP4-201ENST00000259239 ZBTB7AO95365 584 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 NPR1P16066 1061 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 MFAP1P55081 439 aaKnown RBP21.66■■□□□ 1.06
IMP4-201ENST00000259239 CASC1Q6TDU7 716 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 ANKRD2Q9GZV1 360 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 DLEC1Q9Y238 1755 aa21.66■■□□□ 1.06
IMP4-201ENST00000259239 MYH7P12883 1935 aa21.65■■□□□ 1.06
IMP4-201ENST00000259239 MYO5AQ9Y4I1 1855 aaKnown RBP21.65■■□□□ 1.06
IMP4-201ENST00000259239 PHKA1P46020 1223 aa21.65■■□□□ 1.06
IMP4-201ENST00000259239 C10orf71Q711Q0 1435 aa21.65■■□□□ 1.06
IMP4-201ENST00000259239 CHMLP26374 656 aa21.64■■□□□ 1.06
IMP4-201ENST00000259239 UBE4AQ14139 1066 aa21.64■■□□□ 1.06
IMP4-201ENST00000259239 CCDC102BQ68D86 513 aa21.64■■□□□ 1.06
IMP4-201ENST00000259239 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.64■■□□□ 1.06
IMP4-201ENST00000259239 SCARF1Q14162 830 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 C2CD5Q86YS7 1000 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 MASTLQ96GX5 879 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 LTBP1Q14766 1721 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 BBOX1O75936 387 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 KCNJ4P48050 445 aa21.63■■□□□ 1.05
IMP4-201ENST00000259239 SLX4Q8IY92 1834 aa21.62■■□□□ 1.05
IMP4-201ENST00000259239 PPEF1O14829 653 aaPredicted RBP21.62■■□□□ 1.05
IMP4-201ENST00000259239 FSD1Q9BTV5 496 aa21.62■■□□□ 1.05
IMP4-201ENST00000259239 SNRKQ9NRH2 765 aa21.62■■□□□ 1.05
IMP4-201ENST00000259239 PAG1Q9NWQ8 432 aa21.62■■□□□ 1.05
IMP4-201ENST00000259239 ANKIB1Q9P2G1 1089 aa21.62■■□□□ 1.05
IMP4-201ENST00000259239 PSDA5PKW4 1024 aaPredicted RBP21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms