RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 COL9A3Q14050 684 aaPredicted RBP13.42□□□□□ -0.26
TROAP-201ENST00000257909 NAA16Q6N069 864 aaPredicted RBP13.42□□□□□ -0.26
TROAP-201ENST00000257909 AACSQ86V21 672 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 ENGASEQ8NFI3 743 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 BPIFA3Q9BQP9 254 aa13.42□□□□□ -0.26
TROAP-201ENST00000257909 LLPHQ9BRT6 129 aaKnown RBP13.42□□□□□ -0.26
TROAP-201ENST00000257909 ORC3Q9UBD5 711 aaPredicted RBP13.42□□□□□ -0.26
TROAP-201ENST00000257909 SOX12O15370 315 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 ETF1P62495 437 aaKnown RBP13.41□□□□□ -0.26
TROAP-201ENST00000257909 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 ZNF396Q96N95 335 aaPredicted RBP13.41□□□□□ -0.26
TROAP-201ENST00000257909 GOLPH3LQ9H4A5 285 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 FEZ2Q9UHY8 353 aaPredicted RBP13.41□□□□□ -0.26
TROAP-201ENST00000257909 MARF1Q9Y4F3 1742 aaKnown RBP13.41□□□□□ -0.26
TROAP-201ENST00000257909 A0A0D9SFI3 127 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 PI4KAP2A4QPH2 592 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 HOXB7P09629 217 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 CEBPZQ03701 1054 aaKnown RBP13.41□□□□□ -0.26
TROAP-201ENST00000257909 HOMER1Q86YM7 354 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 PI4KAP1Q8N8J0 262 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 DDX11Q96FC9 970 aa13.41□□□□□ -0.26
TROAP-201ENST00000257909 PIK3C2AO00443 1686 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 ARMCX5Q6P1M9 558 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 LRRN4CLQ8ND94 238 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 SMARCC2Q8TAQ2 1214 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 FSD1Q9BTV5 496 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 EFCAB8A8MWE9 144 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 AMPHP49418 695 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
TROAP-201ENST00000257909 USPL1Q5W0Q7 1092 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 NEK1Q96PY6 1258 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 UBXN6Q9BZV1 441 aa13.4□□□□□ -0.26
TROAP-201ENST00000257909 SMC2O95347 1197 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
TROAP-201ENST00000257909 CCDC158Q5M9N0 1113 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 NUTM2GQ5VZR2 741 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 XPO4Q9C0E2 1151 aaKnown RBP13.39□□□□□ -0.27
TROAP-201ENST00000257909 FAM69CQ0P6D2 419 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 FSIP1Q8NA03 581 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 TAF6LQ9Y6J9 622 aa13.39□□□□□ -0.27
TROAP-201ENST00000257909 IFNKQ9P0W0 207 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 DNAI1Q9UI46 699 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 POLR3GO15318 223 aaPredicted RBP13.38□□□□□ -0.27
TROAP-201ENST00000257909 TADA3O75528 432 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 ALDH1L1O75891 902 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 EIF2S2P20042 333 aaKnown RBP13.38□□□□□ -0.27
TROAP-201ENST00000257909 ME1P48163 572 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 LRRFIP1Q32MZ4 808 aaKnown RBP13.38□□□□□ -0.27
TROAP-201ENST00000257909 Q6ZUG5 572 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 SDF4Q9BRK5 362 aa13.38□□□□□ -0.27
TROAP-201ENST00000257909 C9orf78Q9NZ63 289 aaPredicted RBP13.38□□□□□ -0.27
TROAP-201ENST00000257909 CWC15Q9P013 229 aaKnown RBP13.38□□□□□ -0.27
TROAP-201ENST00000257909 TAF5LO75529 589 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 NEK11Q8NG66 645 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 CHPF2Q9P2E5 772 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 PA2G4Q9UQ80 394 aaKnown RBP13.37□□□□□ -0.27
TROAP-201ENST00000257909 NWD1Q149M9 1564 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 SCRN1Q12765 414 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 G3BP1Q13283 466 aaKnown RBP eCLIP13.37□□□□□ -0.27
TROAP-201ENST00000257909 GORABQ5T7V8 394 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 FMR1NBQ8N0W7 255 aaPredicted RBP13.37□□□□□ -0.27
TROAP-201ENST00000257909 MRPS27Q92552 414 aaKnown RBP13.37□□□□□ -0.27
TROAP-201ENST00000257909 KIAA1468Q9P260 1216 aa13.37□□□□□ -0.27
TROAP-201ENST00000257909 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 A0A087WWV3 80 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 PFKFB2O60825 505 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 PSME1Q06323 249 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 ADALQ6DHV7 355 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 KRBA2Q6ZNG9 492 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 ZNF589Q86UQ0 364 aaPredicted RBP13.36□□□□□ -0.27
TROAP-201ENST00000257909 EAF2Q96CJ1 260 aaPredicted RBP13.36□□□□□ -0.27
TROAP-201ENST00000257909 TMEM2Q9UHN6 1383 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.36□□□□□ -0.27
TROAP-201ENST00000257909 A0A1W2PQ27 194 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 A0A1W2PQ64 194 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 A0A1W2PQD8 194 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 TRIM65Q6PJ69 517 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 FCHSD1Q86WN1 690 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 SYTL4Q96C24 671 aaPredicted RBP13.36□□□□□ -0.27
TROAP-201ENST00000257909 RASSF4Q9H2L5 321 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 EFCC1Q9HA90 598 aa13.36□□□□□ -0.27
TROAP-201ENST00000257909 U3KPZ7 1027 aaPredicted RBP13.36□□□□□ -0.27
TROAP-201ENST00000257909 URI1O94763 535 aaPredicted RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 SASH1O94885 1247 aa13.35□□□□□ -0.27
TROAP-201ENST00000257909 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 OAS2P29728 719 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 HDGFP51858 240 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 EIF4A1P60842 406 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 GPR161Q8N6U8 529 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 NSUN7Q8NE18 718 aaKnown RBP13.35□□□□□ -0.27
TROAP-201ENST00000257909 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
TROAP-201ENST00000257909 AK7Q96M32 723 aa13.35□□□□□ -0.27
TROAP-201ENST00000257909 FTOQ9C0B1 505 aaKnown RBP eCLIP13.35□□□□□ -0.27
TROAP-201ENST00000257909 CCDC8Q9H0W5 538 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms