RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CYP19A1P11511 503 aaPredicted RBP17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 PLCB2Q00722 1185 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 TPCN1Q9ULQ1 816 aa17.44■□□□□ 0.38
TRAFD1-201ENST00000257604 HIP1O00291 1037 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 GADD45BO75293 160 aaPredicted RBP17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 SCN11AQ9UI33 1791 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 MARCH10Q8NA82 808 aaPredicted RBP17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 TSC1Q92574 1164 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 PPP1R9BQ96SB3 815 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 LMBRD1Q9NUN5 540 aa17.43■□□□□ 0.38
TRAFD1-201ENST00000257604 CCT2P78371 535 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 GIGYF2Q6Y7W6 1299 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 SEC31BQ9NQW1 1179 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 MAP3K15Q6ZN16 1313 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 SYT1P21579 422 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 ZAP70P43403 619 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 MAP4K1Q92918 833 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 TEX13AQ9BXU3 409 aaPredicted RBP17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 PRDM10Q9NQV6 1147 aa17.42■□□□□ 0.38
TRAFD1-201ENST00000257604 MCMDC2Q4G0Z9 681 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 GPT2Q8TD30 523 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 NIP7Q9Y221 180 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 XIRP1Q702N8 1843 aaKnown RBP17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 PTMSP20962 102 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 CRKLP46109 303 aaKnown RBP17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 BRF1Q92994 677 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 USP42Q9H9J4 1324 aaKnown RBP17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 EP400Q96L91 3159 aa17.41■□□□□ 0.38
TRAFD1-201ENST00000257604 ANKRD18BA2A2Z9 1011 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 ATP2B3Q16720 1220 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 ZNF830Q96NB3 372 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 HAUS7Q99871 368 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 TPM2P07951 284 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 LARP1BQ659C4 914 aaKnown RBP17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 KBTBD3Q8NAB2 608 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 LOC102724428A0A0B4J2F2 783 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 STX6O43752 255 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 CYP21A2P08686 494 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 SIK1P57059 783 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 TTC14Q96N46 770 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 MPHOSPH8Q99549 860 aa17.4■□□□□ 0.38
TRAFD1-201ENST00000257604 PSMA5P28066 241 aa17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 Q6ZUG5 572 aa17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 TTLL11Q8NHH1 800 aa17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 BCL11BQ9C0K0 894 aaPredicted RBP17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 TFIP11Q9UBB9 837 aaKnown RBP17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 PTMAP06454 111 aaKnown RBP17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 GUCY1B3Q02153 619 aa17.39■□□□□ 0.37
TRAFD1-201ENST00000257604 JAK2O60674 1132 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 CUL4AQ13619 759 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 USP48Q86UV5 1035 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 NEK1Q96PY6 1258 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 OFD1O75665 1012 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 PHF14O94880 888 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 BRD1O95696 1058 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 DNM1Q05193 864 aaKnown RBP17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 ITPK1Q13572 414 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 SUSD4Q5VX71 490 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 PCCAP05165 728 aaPredicted RBP17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 CYP2E1P05181 493 aaPredicted RBP17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 ZSWIM6Q9HCJ5 1215 aa17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 GPHNQ9NQX3 736 aaPredicted RBP17.38■□□□□ 0.37
TRAFD1-201ENST00000257604 COL15A1P39059 1388 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 NCOA5Q9HCD5 579 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 TOMM22Q9NS69 142 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 ZNF609O15014 1411 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 WTIPA6NIX2 430 aaPredicted RBP17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 CTSWP56202 376 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 DNTTIP2Q5QJE6 756 aaKnown RBP17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 C17orf53Q8N3J3 647 aaPredicted RBP17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 OSBP2Q969R2 916 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 TMEM63CQ9P1W3 806 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 UBN2Q6ZU65 1347 aa17.37■□□□□ 0.37
TRAFD1-201ENST00000257604 M0R2C6 588 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 APOBRQ0VD83 1088 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 JAG2Q9Y219 1238 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 TOM1O60784 492 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 PHKA1P46020 1223 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 ZNF445P59923 1031 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 CCDC87Q9NVE4 849 aa17.36■□□□□ 0.37
TRAFD1-201ENST00000257604 UQCRHLA0A096LP55 91 aa17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 UQCRHP07919 91 aa17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 SLC9C2Q5TAH2 1124 aa17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 RPS6KB1P23443 525 aa17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 MEX3CQ5U5Q3 659 aaKnown RBP17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 CHMP4CQ96CF2 233 aa17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.35■□□□□ 0.37
TRAFD1-201ENST00000257604 PUS7LQ9H0K6 701 aaKnown RBP17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 PDCL3Q9H2J4 239 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 AKAP2Q9Y2D5 859 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 SPATA31A1Q5TZJ5 1347 aa17.34■□□□□ 0.37
TRAFD1-201ENST00000257604 RNF113AO15541 343 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms