RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 PTPDC1A2A3K4 754 aa14.27□□□□□ -0.12
USP30-201ENST00000257548 PATL2C9JE40 543 aaKnown RBP14.27□□□□□ -0.12
USP30-201ENST00000257548 ABTB2Q8N961 1025 aa14.27□□□□□ -0.12
USP30-201ENST00000257548 TDRD7Q8NHU6 1098 aaKnown RBP14.27□□□□□ -0.12
USP30-201ENST00000257548 PGBD1Q96JS3 809 aa14.27□□□□□ -0.12
USP30-201ENST00000257548 A0A0D9SFI3 127 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 CAVIN2O95810 425 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 TPM1P09493 284 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 RAD51AP2Q09MP3 1159 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 SEC62Q99442 399 aaKnown RBP14.27□□□□□ -0.13
USP30-201ENST00000257548 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 DESI2Q9BSY9 194 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 RAI14Q9P0K7 980 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 KRT32Q14532 448 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 CAGE1Q8TC20 777 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 SNRKQ9NRH2 765 aa14.27□□□□□ -0.13
USP30-201ENST00000257548 DIP2CQ9Y2E4 1556 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 BTBD11A6QL63 1104 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 DDX58O95786 925 aaKnown RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 ZSCAN16Q9H4T2 348 aaPredicted RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 TRDNQ13061 729 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 PPFIBP1Q86W92 1011 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 PCMTD1Q96MG8 357 aaPredicted RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 PTCH1Q13635 1447 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 ERLIN1O75477 346 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 RPS6KB1P23443 525 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 RBM6P78332 1123 aaKnown RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 ST5P78524 1137 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 PPP2R3AQ06190 1150 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 DPCR1Q3MIW9 517 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
USP30-201ENST00000257548 PPP1R13BQ96KQ4 1090 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 CENPHQ9H3R5 247 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 ZSWIM6Q9HCJ5 1215 aa14.26□□□□□ -0.13
USP30-201ENST00000257548 GOLIM4O00461 696 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 FKBP15Q5T1M5 1219 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 RXRAP19793 462 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 LTKP29376 864 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 ETF1P62495 437 aaKnown RBP14.25□□□□□ -0.13
USP30-201ENST00000257548 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 SPECC1Q5M775 1068 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
USP30-201ENST00000257548 ORC3Q9UBD5 711 aaPredicted RBP14.25□□□□□ -0.13
USP30-201ENST00000257548 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 PRR36Q9H6K5 1346 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 IQSEC2Q5JU85 1478 aa14.25□□□□□ -0.13
USP30-201ENST00000257548 DNAJC21Q5F1R6 531 aaKnown RBP14.25□□□□□ -0.13
USP30-201ENST00000257548 CBFA2T2O43439 604 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 HSP90AB3PQ58FF7 597 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 LRRN4CLQ8ND94 238 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 TTC14Q96N46 770 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 PTPRMP28827 1452 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 FANCCQ00597 558 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 E2F4Q16254 413 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 RRP12Q5JTH9 1297 aaKnown RBP14.24□□□□□ -0.13
USP30-201ENST00000257548 MICALL1Q8N3F8 863 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 CNNM3Q8NE01 707 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 PIK3C2BO00750 1634 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 PPLO60437 1756 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 MNAT1P51948 309 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 ADKP55263 362 aaKnown RBP14.24□□□□□ -0.13
USP30-201ENST00000257548 TSR1Q2NL82 804 aaKnown RBP14.24□□□□□ -0.13
USP30-201ENST00000257548 SMARCE1Q969G3 411 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 EYA1Q99502 592 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 ACBD3Q9H3P7 528 aa14.24□□□□□ -0.13
USP30-201ENST00000257548 CD163L1Q9NR16 1453 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 ATP1A3P13637 1013 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 PLA2G4DQ86XP0 818 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 TAF6LQ9Y6J9 622 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 MYO5BQ9ULV0 1848 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 GOLGA8BA8MQT2 603 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 KIF5CO60282 957 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 SYKP43405 635 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 HDGFP51858 240 aaKnown RBP14.23□□□□□ -0.13
USP30-201ENST00000257548 SETQ01105 290 aaPredicted RBP14.23□□□□□ -0.13
USP30-201ENST00000257548 MRFAP1L1Q96HT8 127 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 STAP2Q9UGK3 403 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 MAP3K19Q56UN5 1328 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 ACEP12821 1306 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 PI4K2BQ8TCG2 481 aa14.23□□□□□ -0.13
USP30-201ENST00000257548 ATP5J2-PTCD1G3V325 749 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 EPB41L2O43491 1005 aaKnown RBP14.22□□□□□ -0.13
USP30-201ENST00000257548 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
USP30-201ENST00000257548 STX17P56962 302 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 WWC2Q6AWC2 1192 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 FUCA2Q9BTY2 467 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 HOOK1Q9UJC3 728 aaKnown RBP14.22□□□□□ -0.13
USP30-201ENST00000257548 SPTLC2O15270 562 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 CSB-PGBD3P0DP91 1061 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 SSH3Q8TE77 659 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 TLR7Q9NYK1 1049 aaKnown RBP14.22□□□□□ -0.13
USP30-201ENST00000257548 SHPRHQ149N8 1683 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 MTX1Q13505 466 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 LONRF3Q496Y0 759 aa14.22□□□□□ -0.13
USP30-201ENST00000257548 ZNF589Q86UQ0 364 aaPredicted RBP14.22□□□□□ -0.13
USP30-201ENST00000257548 PIK3R4Q99570 1358 aa14.21□□□□□ -0.13
USP30-201ENST00000257548 TTC31Q49AM3 519 aaPredicted RBP14.21□□□□□ -0.13
USP30-201ENST00000257548 EAF2Q96CJ1 260 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms