RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 PCCAP05165 728 aaPredicted RBP14.04□□□□□ -0.16
LIN28A-201ENST00000254231 MCCP23508 829 aa14.04□□□□□ -0.16
LIN28A-201ENST00000254231 VSIG10Q8N0Z9 540 aa14.04□□□□□ -0.16
LIN28A-201ENST00000254231 JAKMIP1Q96N16 626 aaKnown RBP14.04□□□□□ -0.16
LIN28A-201ENST00000254231 IL15P40933 162 aaPredicted RBP14.03□□□□□ -0.16
LIN28A-201ENST00000254231 ESYT1Q9BSJ8 1104 aa14.03□□□□□ -0.16
LIN28A-201ENST00000254231 RGPD1P0DJD0 1748 aa14.03□□□□□ -0.16
LIN28A-201ENST00000254231 PHRF1Q9P1Y6 1649 aaKnown RBP14.03□□□□□ -0.16
LIN28A-201ENST00000254231 SLC9C2Q5TAH2 1124 aa14.03□□□□□ -0.16
LIN28A-201ENST00000254231 CASTP20810 708 aaKnown RBP14.03□□□□□ -0.16
LIN28A-201ENST00000254231 KLRK1P26718 216 aa14.03□□□□□ -0.16
LIN28A-201ENST00000254231 TTLL5Q6EMB2 1281 aa14.03□□□□□ -0.16
LIN28A-201ENST00000254231 ZNF589Q86UQ0 364 aaPredicted RBP14.03□□□□□ -0.16
LIN28A-201ENST00000254231 MMP10P09238 476 aa14.02□□□□□ -0.16
LIN28A-201ENST00000254231 VPS53Q5VIR6 699 aa14.02□□□□□ -0.16
LIN28A-201ENST00000254231 PI4K2BQ8TCG2 481 aa14.02□□□□□ -0.16
LIN28A-201ENST00000254231 A0A0G2JLW4 131 aa14.02□□□□□ -0.17
LIN28A-201ENST00000254231 ATG9AQ7Z3C6 839 aa14.02□□□□□ -0.17
LIN28A-201ENST00000254231 ECM2O94769 699 aaPredicted RBP14.02□□□□□ -0.17
LIN28A-201ENST00000254231 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.17
LIN28A-201ENST00000254231 RPS6KA4O75676 772 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 SERPINB2P05120 415 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 CHRNDQ07001 517 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 CCDC144CPQ8IYA2 1237 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 MINDY4BA8MYZ0 360 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 CHRNA5P30532 468 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 RBM5P52756 815 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIN28A-201ENST00000254231 PROM2Q8N271 834 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 TAF6LQ9Y6J9 622 aa14.01□□□□□ -0.17
LIN28A-201ENST00000254231 COL9A3Q14050 684 aaPredicted RBP14□□□□□ -0.17
LIN28A-201ENST00000254231 DOK7Q18PE1 504 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 NECAB1Q8N987 351 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 INCENPQ9NQS7 918 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 TNS2Q63HR2 1409 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 COPRSQ9NQ92 184 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 ZNF827Q17R98 1081 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 RASEFQ8IZ41 740 aa14□□□□□ -0.17
LIN28A-201ENST00000254231 RFX5P48382 616 aaPredicted RBP13.99□□□□□ -0.17
LIN28A-201ENST00000254231 USP26Q9BXU7 913 aa13.99□□□□□ -0.17
LIN28A-201ENST00000254231 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
LIN28A-201ENST00000254231 RXRAP19793 462 aa13.99□□□□□ -0.17
LIN28A-201ENST00000254231 RPS8P62241 208 aaKnown RBP13.99□□□□□ -0.17
LIN28A-201ENST00000254231 R3HDM1Q15032 1099 aaKnown RBP13.99□□□□□ -0.17
LIN28A-201ENST00000254231 ZGPATQ8N5A5 531 aaKnown RBP13.99□□□□□ -0.17
LIN28A-201ENST00000254231 CASP7P55210 303 aa13.99□□□□□ -0.17
LIN28A-201ENST00000254231 RUFY2Q8WXA3 655 aa13.99□□□□□ -0.17
LIN28A-201ENST00000254231 CCDC102BQ68D86 513 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 MAGEB6Q8N7X4 407 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 CDC5LQ99459 802 aaKnown RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 BCL2L12Q9HB09 334 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 ADCK5Q3MIX3 580 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 RBM26Q5T8P6 1007 aaKnown RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 COL23A1Q86Y22 540 aaPredicted RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 ZNF34Q8IZ26 560 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 EVI5LQ96CN4 794 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 DDX11Q96FC9 970 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 TMX4Q9H1E5 349 aaPredicted RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 NARFQ9UHQ1 456 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 ZKSCAN1P17029 563 aaPredicted RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
LIN28A-201ENST00000254231 RBM8AQ9Y5S9 174 aaKnown RBP13.98□□□□□ -0.17
LIN28A-201ENST00000254231 ST18O60284 1047 aa13.97□□□□□ -0.17
LIN28A-201ENST00000254231 PRDM1O75626 825 aa13.97□□□□□ -0.17
LIN28A-201ENST00000254231 PDE8BO95263 885 aa13.97□□□□□ -0.17
LIN28A-201ENST00000254231 AKAP2Q9Y2D5 859 aa13.97□□□□□ -0.17
LIN28A-201ENST00000254231 SLC5A1P13866 664 aa13.96□□□□□ -0.17
LIN28A-201ENST00000254231 CCT2P78371 535 aaKnown RBP13.96□□□□□ -0.17
LIN28A-201ENST00000254231 ZKSCAN3Q9BRR0 538 aa13.96□□□□□ -0.17
LIN28A-201ENST00000254231 MXD3Q9BW11 206 aa13.96□□□□□ -0.17
LIN28A-201ENST00000254231 ERBB4Q15303 1308 aa13.96□□□□□ -0.17
LIN28A-201ENST00000254231 ILDR1Q86SU0 546 aaPredicted RBP13.96□□□□□ -0.17
LIN28A-201ENST00000254231 NTSR2O95665 410 aa13.96□□□□□ -0.18
LIN28A-201ENST00000254231 RGS17Q9UGC6 210 aaPredicted RBP13.96□□□□□ -0.18
LIN28A-201ENST00000254231 SLIT2O94813 1529 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 UFL1O94874 794 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 MCAMP43121 646 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 FERMT3Q86UX7 667 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 AIDAQ96BJ3 306 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 ANO8Q9HCE9 1232 aaPredicted RBP13.95□□□□□ -0.18
LIN28A-201ENST00000254231 COL18A1P39060 1754 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 ATP2B2Q01814 1243 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 ARMT1Q9H993 441 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 PARP3Q9Y6F1 533 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 EIF5BO60841 1220 aaKnown RBP13.95□□□□□ -0.18
LIN28A-201ENST00000254231 ST5P78524 1137 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 CEBPZQ03701 1054 aaKnown RBP13.95□□□□□ -0.18
LIN28A-201ENST00000254231 CCDC83Q8IWF9 413 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 SDR42E1Q8WUS8 393 aa13.95□□□□□ -0.18
LIN28A-201ENST00000254231 ERVV-1B6SEH8 477 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 GYS1P13807 737 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 VPS37CA5D8V6 355 aaPredicted RBP13.94□□□□□ -0.18
LIN28A-201ENST00000254231 PRKAB2O43741 272 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 PKP1Q13835 747 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 PUS7LQ9H0K6 701 aaKnown RBP13.94□□□□□ -0.18
LIN28A-201ENST00000254231 GDPD2Q9HCC8 539 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 PRR5LQ6MZQ0 368 aa13.94□□□□□ -0.18
LIN28A-201ENST00000254231 MTX1Q13505 466 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms