RNA–Protein interactions for RNA: ENST00000253925.11

PPFIA1-201, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA1, Length 5,234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-201ENST00000253925 BMP2KQ9NSY1 1161 aaPredicted RBP22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 PTPDC1A2A3K4 754 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 SLC27A2O14975 620 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 CCDC181Q5TID7 509 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 ZNF853P0CG23 659 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 CALCOCO1Q9P1Z2 691 aa22.2■■□□□ 1.14
PPFIA1-201ENST00000253925 ZNF287Q9HBT7 754 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 MAP3K4Q9Y6R4 1608 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 TANGO6Q9C0B7 1094 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 LGR6Q9HBX8 967 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 TMEM63CQ9P1W3 806 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 TMEM2Q9UHN6 1383 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 TM6SF1Q9BZW5 370 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 PRC1O43663 620 aa22.19■■□□□ 1.14
PPFIA1-201ENST00000253925 ZCCHC11Q5TAX3 1644 aaKnown RBP22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 KIAA1328Q86T90 577 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 FSD2A1L4K1 749 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 SPTLC2O15270 562 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 APOBRQ0VD83 1088 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 AOPEPQ8N6M6 819 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 PHF23Q9BUL5 403 aaPredicted RBP22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 TSPYL1Q9H0U9 437 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 KIF4BQ2VIQ3 1234 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 EIF4A1P60842 406 aaKnown RBP22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 ISM2Q6H9L7 571 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 CCDC148Q8NFR7 591 aa22.18■■□□□ 1.14
PPFIA1-201ENST00000253925 BICDL1Q6ZP65 573 aa22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 OSBPL3Q9H4L5 887 aa22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 ZNF790Q6PG37 636 aa22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 METTL22Q9BUU2 404 aaPredicted RBP22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 KRT23Q9C075 422 aa22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 MYO6Q9UM54 1294 aa22.17■■□□□ 1.14
PPFIA1-201ENST00000253925 UBASH3AP57075 661 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 HELLSQ9NRZ9 838 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 PTGS1P23219 599 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 ATP2B2Q01814 1243 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 MEX3CQ5U5Q3 659 aaKnown RBP22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 TMTC2Q8N394 836 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 CNNM2Q9H8M5 875 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 CLTCL1P53675 1640 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 YEATS2Q9ULM3 1422 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 LUZP1Q86V48 1076 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 ZNF397Q8NF99 534 aaPredicted RBP22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 PPP1R9BQ96SB3 815 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 MKNK2Q9HBH9 465 aa22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 IBTKQ9P2D0 1353 aaPredicted RBP22.16■■□□□ 1.14
PPFIA1-201ENST00000253925 FAM227BQ96M60 508 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 PYM1Q9BRP8 204 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 EFCAB6Q5THR3 1501 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 EXOC5O00471 708 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 NLRP5P59047 1200 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 SLC9C2Q5TAH2 1124 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 CDC5LQ99459 802 aaKnown RBP22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 USP5P45974 858 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 WTAPQ15007 396 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 TNNI3KQ59H18 835 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 CT47A1Q5JQC4 288 aaPredicted RBP22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 BRAPQ7Z569 592 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 FPGT-TNNI3KV9GXZ4 949 aa22.15■■□□□ 1.14
PPFIA1-201ENST00000253925 GADD45BO75293 160 aaPredicted RBP22.14■■□□□ 1.14
PPFIA1-201ENST00000253925 SAMD1Q6SPF0 538 aaPredicted RBP22.14■■□□□ 1.14
PPFIA1-201ENST00000253925 IL17REQ8NFR9 667 aa22.14■■□□□ 1.14
PPFIA1-201ENST00000253925 LLPHQ9BRT6 129 aaKnown RBP22.14■■□□□ 1.14
PPFIA1-201ENST00000253925 TERF1P54274 439 aa22.14■■□□□ 1.13
PPFIA1-201ENST00000253925 TUBB4AP04350 444 aa22.14■■□□□ 1.13
PPFIA1-201ENST00000253925 ZHX3Q9H4I2 956 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 CCDC194A0A1B0GVG4 234 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 CPLX3Q8WVH0 158 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 CCDC102AQ96A19 550 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 SUCLG2Q96I99 432 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 STAP2Q9UGK3 403 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 PALD1Q9ULE6 856 aa22.13■■□□□ 1.13
PPFIA1-201ENST00000253925 BMP15O95972 392 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 SSBP05455 408 aaKnown RBP eCLIP22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 GAS2L3Q86XJ1 694 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 DZIP1Q86YF9 867 aaKnown RBP22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 LRRIQ1Q96JM4 1722 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 NBPF6Q5VWK0 638 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 NBPF4Q96M43 638 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 C19orf44Q9H6X5 657 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 PKP1Q13835 747 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 CHST3Q7LGC8 479 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 MARCKSP29966 332 aaPredicted RBP22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 SIRT2Q8IXJ6 389 aa22.12■■□□□ 1.13
PPFIA1-201ENST00000253925 YEATS4O95619 227 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 JAKMIP3Q5VZ66 844 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 NUP88Q99567 741 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 SEC63Q9UGP8 760 aaKnown RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 NUTM2BA6NNL0 878 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 NUTM2EB1AL46 878 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 CD2BP2O95400 341 aaKnown RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 BMS1Q14692 1282 aaKnown RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 ARHGAP30Q7Z6I6 1101 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 NUTM2AQ8IVF1 878 aaPredicted RBP22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 DBNDD2Q9BQY9 259 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 KIF5BP33176 963 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 RTN1Q16799 776 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 FKBP15Q5T1M5 1219 aa22.11■■□□□ 1.13
PPFIA1-201ENST00000253925 PLBD2Q8NHP8 589 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms