RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 R3HDMLQ9H3Y0 253 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 TRIM17Q9Y577 477 aa15.88■□□□□ 0.13
RFPL3-201ENST00000249007 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
RFPL3-201ENST00000249007 MKRN3Q13064 507 aaKnown RBP15.87■□□□□ 0.13
RFPL3-201ENST00000249007 RBBP6Q7Z6E9 1792 aaKnown RBP15.87■□□□□ 0.13
RFPL3-201ENST00000249007 DDX60Q8IY21 1712 aaKnown RBP15.87■□□□□ 0.13
RFPL3-201ENST00000249007 VIL1P09327 827 aaKnown RBP15.86■□□□□ 0.13
RFPL3-201ENST00000249007 CNGB1Q14028 1251 aaPredicted RBP15.86■□□□□ 0.13
RFPL3-201ENST00000249007 TTLL12Q14166 644 aaPredicted RBP15.86■□□□□ 0.13
RFPL3-201ENST00000249007 POLLQ9UGP5 575 aa15.86■□□□□ 0.13
RFPL3-201ENST00000249007 SCN9AQ15858 1988 aa15.86■□□□□ 0.13
RFPL3-201ENST00000249007 ERBB4Q15303 1308 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 PITPNM2Q9BZ72 1349 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 ZNF280AP59817 542 aaPredicted RBP15.85■□□□□ 0.13
RFPL3-201ENST00000249007 EIF4A1P60842 406 aaKnown RBP15.85■□□□□ 0.13
RFPL3-201ENST00000249007 OTOP1Q7RTM1 612 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 PNISRQ8TF01 805 aaKnown RBP15.85■□□□□ 0.13
RFPL3-201ENST00000249007 EYA3Q99504 573 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 KDM3BQ7LBC6 1761 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
RFPL3-201ENST00000249007 U2AF1L5P0DN76 240 aaPredicted RBP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 EN2P19622 333 aaPredicted RBP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 U2AF1Q01081 240 aaKnown RBP eCLIP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 CFAP53Q96M91 514 aa15.84■□□□□ 0.13
RFPL3-201ENST00000249007 TRMT112Q9UI30 125 aaKnown RBP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 CENPBP07199 599 aaPredicted RBP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 GPSM2P81274 684 aa15.84■□□□□ 0.13
RFPL3-201ENST00000249007 NLRP10Q86W26 655 aa15.84■□□□□ 0.13
RFPL3-201ENST00000249007 SCAF8Q9UPN6 1271 aaKnown RBP15.84■□□□□ 0.13
RFPL3-201ENST00000249007 NUDCQ9Y266 331 aa15.84■□□□□ 0.13
RFPL3-201ENST00000249007 LAMA3Q16787 3333 aa15.83■□□□□ 0.13
RFPL3-201ENST00000249007 ALDH1A1P00352 501 aa15.83■□□□□ 0.12
RFPL3-201ENST00000249007 PRAMEF18Q5VWM3 479 aa15.83■□□□□ 0.12
RFPL3-201ENST00000249007 ERICH6Q7L0X2 663 aa15.83■□□□□ 0.12
RFPL3-201ENST00000249007 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.12
RFPL3-201ENST00000249007 AGBL3Q8NEM8 1001 aa15.83■□□□□ 0.12
RFPL3-201ENST00000249007 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.12
RFPL3-201ENST00000249007 G3V3G9 751 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 TCIRG1Q13488 830 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 HSP90AB3PQ58FF7 597 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 DCAF8Q5TAQ9 597 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 LRP10Q7Z4F1 713 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 TBC1D16Q8TBP0 767 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 CELF1Q92879 486 aaKnown RBP15.82■□□□□ 0.12
RFPL3-201ENST00000249007 ZC3H12CQ9C0D7 883 aaKnown RBP15.82■□□□□ 0.12
RFPL3-201ENST00000249007 MYOZ2Q9NPC6 264 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 ZNF609O15014 1411 aa15.82■□□□□ 0.12
RFPL3-201ENST00000249007 USP17L8P0C7I0 530 aa15.81■□□□□ 0.12
RFPL3-201ENST00000249007 NF2P35240 595 aa15.81■□□□□ 0.12
RFPL3-201ENST00000249007 RSBN1LQ6PCB5 846 aaPredicted RBP15.81■□□□□ 0.12
RFPL3-201ENST00000249007 NECTIN2Q92692 538 aa15.81■□□□□ 0.12
RFPL3-201ENST00000249007 ARMC5Q96C12 935 aa15.81■□□□□ 0.12
RFPL3-201ENST00000249007 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
RFPL3-201ENST00000249007 H0YGN5 161 aa15.79■□□□□ 0.12
RFPL3-201ENST00000249007 PDIA6Q15084 440 aa15.79■□□□□ 0.12
RFPL3-201ENST00000249007 TMEM106CQ9BVX2 250 aa15.79■□□□□ 0.12
RFPL3-201ENST00000249007 ANXA1P04083 346 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 PTPN12Q05209 780 aaKnown RBP15.78■□□□□ 0.12
RFPL3-201ENST00000249007 PROSER3Q2NL68 480 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 SPRYD7Q5W111 196 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 OTUD5Q96G74 571 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 ERO1AQ96HE7 468 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 EIF2S2P20042 333 aaKnown RBP15.78■□□□□ 0.12
RFPL3-201ENST00000249007 ARMC9Q7Z3E5 817 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 ZNF428Q96B54 188 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 GMLQ99445 158 aa15.78■□□□□ 0.12
RFPL3-201ENST00000249007 UFL1O94874 794 aa15.77■□□□□ 0.11
RFPL3-201ENST00000249007 INHBEP58166 350 aa15.77■□□□□ 0.11
RFPL3-201ENST00000249007 SF3B3Q15393 1217 aaKnown RBP15.77■□□□□ 0.11
RFPL3-201ENST00000249007 NBPF9Q3BBW0 867 aa15.77■□□□□ 0.11
RFPL3-201ENST00000249007 IFNL1Q8IU54 200 aa15.77■□□□□ 0.11
RFPL3-201ENST00000249007 COL4A1P02462 1669 aa15.77■□□□□ 0.11
RFPL3-201ENST00000249007 MANSC4A6NHS7 340 aaPredicted RBP15.76■□□□□ 0.11
RFPL3-201ENST00000249007 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
RFPL3-201ENST00000249007 AIMP1Q12904 312 aaKnown RBP15.76■□□□□ 0.11
RFPL3-201ENST00000249007 PRKG1Q13976 671 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 CHRDL2Q6WN34 429 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 COPS6Q7L5N1 327 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 CD99L2Q8TCZ2 262 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 EFCC1Q9HA90 598 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 PODXL2Q9NZ53 605 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 ANKIB1Q9P2G1 1089 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 PSME4Q14997 1843 aa15.76■□□□□ 0.11
RFPL3-201ENST00000249007 RPS8P62241 208 aaKnown RBP15.75■□□□□ 0.11
RFPL3-201ENST00000249007 XAGE3Q8WTP9 111 aa15.75■□□□□ 0.11
RFPL3-201ENST00000249007 ZNF333Q96JL9 665 aa15.75■□□□□ 0.11
RFPL3-201ENST00000249007 DLG5Q8TDM6 1919 aa15.74■□□□□ 0.11
RFPL3-201ENST00000249007 LDLRAD1Q5T700 205 aa15.74■□□□□ 0.11
RFPL3-201ENST00000249007 GGA1Q9UJY5 639 aa15.74■□□□□ 0.11
RFPL3-201ENST00000249007 USP17L3A6NCW0 530 aa15.73■□□□□ 0.11
RFPL3-201ENST00000249007 USP17L4A6NCW7 530 aa15.73■□□□□ 0.11
RFPL3-201ENST00000249007 IGF2BP3O00425 579 aaKnown RBP eCLIP15.73■□□□□ 0.11
RFPL3-201ENST00000249007 NEFMP07197 916 aa15.73■□□□□ 0.11
RFPL3-201ENST00000249007 USP17L1Q7RTZ2 530 aa15.73■□□□□ 0.11
RFPL3-201ENST00000249007 FAM89AQ96GI7 184 aa15.73■□□□□ 0.11
RFPL3-201ENST00000249007 ANGEL1Q9UNK9 670 aaKnown RBP15.73■□□□□ 0.11
RFPL3-201ENST00000249007 WNT10BO00744 389 aa15.72■□□□□ 0.11
RFPL3-201ENST00000249007 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
RFPL3-201ENST00000249007 OGFOD1Q8N543 542 aa15.72■□□□□ 0.11
RFPL3-201ENST00000249007 RBM27Q9P2N5 1060 aaKnown RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms