RNA–Protein interactions for RNA: ENST00000248550.7

PHTF2-201, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 4,778 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-201ENST00000248550 SP3Q02447 781 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 HS1BP3Q53T59 392 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 RSPH3Q86UC2 560 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 MCOLN1Q9GZU1 580 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 EVA1BQ9NVM1 165 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 NSFL1CQ9UNZ2 370 aaKnown RBP4.33□□□□□ -1.72
PHTF2-201ENST00000248550 ATP5J2-PTCD1G3V325 749 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 NCK2O43639 380 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 FOXD2O60548 495 aaPredicted RBP4.33□□□□□ -1.72
PHTF2-201ENST00000248550 NR1I2O75469 434 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 CHMP4CQ96CF2 233 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 C9orf78Q9NZ63 289 aaPredicted RBP4.33□□□□□ -1.72
PHTF2-201ENST00000248550 NHSQ6T4R5 1651 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 CCDC57Q2TAC2 916 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 SLAIN1Q8ND83 568 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 ADGRB1O14514 1584 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 RNF123Q5XPI4 1314 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 A0A1W2PPC1 479 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 CFAP70Q5T0N1 1121 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 TBC1D9Q6ZT07 1266 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 RNF208Q9H0X6 261 aa4.33□□□□□ -1.72
PHTF2-201ENST00000248550 PIK3C2AO00443 1686 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 UNCXA6NJT0 531 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 MDM2Q00987 491 aaPredicted RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 E2F5Q15329 346 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 FAM182BQ5T319 152 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 DPP9Q86TI2 863 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 A0A0G2JLW4 131 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 FOSL2P15408 326 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 ZKSCAN1P17029 563 aaPredicted RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 TMEM132AQ24JP5 1023 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 CCDC27Q2M243 656 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 TTLL7Q6ZT98 887 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 ANKRD23Q86SG2 305 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 CCDC26Q8TAB7 109 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 BTBD11A6QL63 1104 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 DHX16O60231 1041 aaKnown RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 NCBP1Q09161 790 aaKnown RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 GADL1Q6ZQY3 521 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 DZIP1Q86YF9 867 aaKnown RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 HACE1Q8IYU2 909 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 DDX17Q92841 729 aaKnown RBP4.32□□□□□ -1.72
PHTF2-201ENST00000248550 PCGF6Q9BYE7 350 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 NMRK2Q9NPI5 230 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 SALL3Q9BXA9 1300 aa4.32□□□□□ -1.72
PHTF2-201ENST00000248550 NCAM2O15394 837 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 KIF4BQ2VIQ3 1234 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 PPP4R3AQ6IN85 833 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 SLC51AQ86UW1 340 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 JARID2Q92833 1246 aaPredicted RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 HMX1Q9NP08 348 aaPredicted RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 COL5A2P05997 1499 aaPredicted RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 EIF2S2P20042 333 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 USP14P54578 494 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ANKRD13AQ8IZ07 590 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ARHGEF28Q8N1W1 1705 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 FTOQ9C0B1 505 aaKnown RBP eCLIP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 AAASQ9NRG9 546 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ORC3Q9UBD5 711 aaPredicted RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ADGRF5Q8IZF2 1346 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 TNS1Q9HBL0 1735 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ANKRD18BA2A2Z9 1011 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 USP17L8P0C7I0 530 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 RAG1P15918 1043 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 TMEM199Q8N511 208 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 SCLT1Q96NL6 688 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 WNK3Q9BYP7 1800 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 FAM205AQ6ZU69 1335 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 ANKRD36BQ8N2N9 1353 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 IPO8O15397 1037 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 KIF4AO95239 1232 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 PPIGQ13427 754 aaKnown RBP eCLIP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 GPR161Q8N6U8 529 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 PPM1EQ8WY54 764 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 SLC28A3Q9HAS3 691 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 TCP11L1Q9NUJ3 509 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 PUF60Q9UHX1 559 aaKnown RBP4.31□□□□□ -1.72
PHTF2-201ENST00000248550 GMEB2Q9UKD1 530 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 LMO7Q8WWI1 1683 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 KAT6BQ8WYB5 2073 aa4.31□□□□□ -1.72
PHTF2-201ENST00000248550 EFCAB14O75071 495 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 UFL1O94874 794 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 SLC5A1P13866 664 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 MNX1P50219 401 aaPredicted RBP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 CLEC4GQ6UXB4 293 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 RNF180Q86T96 592 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 MIER1Q8N108 512 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 DDX11Q96FC9 970 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 ZNF341Q9BYN7 854 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 WDR70Q9NW82 654 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 CARMIL3Q8ND23 1372 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 GJB1P08034 283 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 GCLCP48506 637 aaPredicted RBP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 KIF23Q02241 960 aaPredicted RBP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 TMEM31Q5JXX7 168 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 HHIPL1Q96JK4 782 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 LRFN2Q9ULH4 789 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 U3KPZ7 1027 aaPredicted RBP4.3□□□□□ -1.72
PHTF2-201ENST00000248550 AKAP12Q02952 1782 aa4.3□□□□□ -1.72
PHTF2-201ENST00000248550 GNAT3A8MTJ3 354 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms