RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 DNTTIP2Q5QJE6 756 aaKnown RBP30.26■■■□□ 2.43
RAB40C-201ENST00000248139 NUP62CLQ9H1M0 184 aa30.26■■■□□ 2.43
RAB40C-201ENST00000248139 TOM1L2Q6ZVM7 507 aa30.26■■■□□ 2.43
RAB40C-201ENST00000248139 FAM13BQ9NYF5 915 aa30.26■■■□□ 2.43
RAB40C-201ENST00000248139 U3KPZ7 1027 aaPredicted RBP30.26■■■□□ 2.43
RAB40C-201ENST00000248139 ARFGEF2Q9Y6D5 1785 aa30.26■■■□□ 2.43
RAB40C-201ENST00000248139 CCT2P78371 535 aaKnown RBP30.25■■■□□ 2.43
RAB40C-201ENST00000248139 PAG1Q9NWQ8 432 aa30.25■■■□□ 2.43
RAB40C-201ENST00000248139 RRP9O43818 475 aaKnown RBP30.25■■■□□ 2.43
RAB40C-201ENST00000248139 APOBRQ0VD83 1088 aa30.25■■■□□ 2.43
RAB40C-201ENST00000248139 LUZP1Q86V48 1076 aa30.25■■■□□ 2.43
RAB40C-201ENST00000248139 PGBD1Q96JS3 809 aa30.25■■■□□ 2.43
RAB40C-201ENST00000248139 FTOQ9C0B1 505 aaKnown RBP eCLIP30.25■■■□□ 2.43
RAB40C-201ENST00000248139 ALDH8A1Q9H2A2 487 aaPredicted RBP30.25■■■□□ 2.43
RAB40C-201ENST00000248139 CWC25Q9NXE8 425 aaPredicted RBP30.25■■■□□ 2.43
RAB40C-201ENST00000248139 KRT32Q14532 448 aa30.24■■■□□ 2.43
RAB40C-201ENST00000248139 CCDC192P0DO97 292 aa30.24■■■□□ 2.43
RAB40C-201ENST00000248139 LMTK3Q96Q04 1460 aa30.23■■■□□ 2.43
RAB40C-201ENST00000248139 NR1I2O75469 434 aa30.23■■■□□ 2.43
RAB40C-201ENST00000248139 NCOA5Q9HCD5 579 aaKnown RBP30.23■■■□□ 2.43
RAB40C-201ENST00000248139 H3BQV1 296 aa30.23■■■□□ 2.43
RAB40C-201ENST00000248139 MAP3K11Q16584 847 aa30.23■■■□□ 2.43
RAB40C-201ENST00000248139 IFFO2Q5TF58 517 aa30.23■■■□□ 2.43
RAB40C-201ENST00000248139 TTLL5Q6EMB2 1281 aa30.22■■■□□ 2.43
RAB40C-201ENST00000248139 MRVI1Q9Y6F6 885 aa30.22■■■□□ 2.43
RAB40C-201ENST00000248139 TYRO3Q06418 890 aa30.22■■■□□ 2.43
RAB40C-201ENST00000248139 TNMDQ9H2S6 317 aa30.22■■■□□ 2.43
RAB40C-201ENST00000248139 ZCRB1Q8TBF4 217 aaKnown RBP30.21■■■□□ 2.43
RAB40C-201ENST00000248139 BICD2Q8TD16 824 aa30.21■■■□□ 2.43
RAB40C-201ENST00000248139 SPATA31A3Q5VYP0 1347 aa30.21■■■□□ 2.43
RAB40C-201ENST00000248139 PRDM11Q9NQV5 511 aa30.21■■■□□ 2.43
RAB40C-201ENST00000248139 GUCY1B3Q02153 619 aa30.2■■■□□ 2.43
RAB40C-201ENST00000248139 HSP90AB3PQ58FF7 597 aa30.2■■■□□ 2.43
RAB40C-201ENST00000248139 SCAND2PQ9GZW5 306 aaPredicted RBP30.2■■■□□ 2.43
RAB40C-201ENST00000248139 A0A1B0GUL7 405 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 RESTQ13127 1097 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 TNS3Q68CZ2 1445 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 ELP1O95163 1332 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 FKBP4Q02790 459 aaKnown RBP eCLIP30.19■■■□□ 2.42
RAB40C-201ENST00000248139 NOLC1Q14978 699 aaKnown RBP eCLIP30.19■■■□□ 2.42
RAB40C-201ENST00000248139 IFIT1P09914 478 aaKnown RBP30.19■■■□□ 2.42
RAB40C-201ENST00000248139 HSPA2P54652 639 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 ANO6Q4KMQ2 910 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 ARID3AQ99856 593 aa30.19■■■□□ 2.42
RAB40C-201ENST00000248139 GPHNQ9NQX3 736 aaPredicted RBP30.19■■■□□ 2.42
RAB40C-201ENST00000248139 TSC1Q92574 1164 aa30.18■■■□□ 2.42
RAB40C-201ENST00000248139 CTDNEP1O95476 244 aa30.18■■■□□ 2.42
RAB40C-201ENST00000248139 STRN4Q9NRL3 753 aa30.18■■■□□ 2.42
RAB40C-201ENST00000248139 HSPD1P10809 573 aaKnown RBP30.17■■■□□ 2.42
RAB40C-201ENST00000248139 KCNF1Q9H3M0 494 aa30.17■■■□□ 2.42
RAB40C-201ENST00000248139 PIBF1Q8WXW3 757 aa30.17■■■□□ 2.42
RAB40C-201ENST00000248139 GLI3P10071 1580 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 EYA2O00167 538 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 ADORA1P30542 326 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 UBE2Q2Q8WVN8 375 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 M0R2C6 588 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 DHX32Q7L7V1 743 aaKnown RBP30.16■■■□□ 2.42
RAB40C-201ENST00000248139 CADPS2Q86UW7 1296 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 PYCARDQ9ULZ3 195 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 MAST3O60307 1309 aa30.16■■■□□ 2.42
RAB40C-201ENST00000248139 IL15P40933 162 aaPredicted RBP30.15■■■□□ 2.42
RAB40C-201ENST00000248139 HAND2P61296 217 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 NSUN7Q8NE18 718 aaKnown RBP30.15■■■□□ 2.42
RAB40C-201ENST00000248139 SH3TC1Q8TE82 1336 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 A0A087WWV3 80 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 SYNE4Q8N205 404 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 FAM200AQ8TCP9 573 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 CBX8Q9HC52 389 aa30.15■■■□□ 2.42
RAB40C-201ENST00000248139 STRCP1A6NGW2 1772 aa30.14■■■□□ 2.42
RAB40C-201ENST00000248139 E7EWF7 191 aa30.14■■■□□ 2.42
RAB40C-201ENST00000248139 SASS6Q6UVJ0 657 aa30.14■■■□□ 2.42
RAB40C-201ENST00000248139 ZMYM1Q5SVZ6 1142 aa30.14■■■□□ 2.42
RAB40C-201ENST00000248139 PTPDC1A2A3K4 754 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 TERF1P54274 439 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 RAB11FIP4Q86YS3 637 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 OSBP2Q969R2 916 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 FAM89AQ96GI7 184 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 PI16Q6UXB8 463 aa30.13■■■□□ 2.41
RAB40C-201ENST00000248139 DNAJC25Q9H1X3 360 aa30.12■■■□□ 2.41
RAB40C-201ENST00000248139 FAM177BA6PVY3 158 aa30.12■■■□□ 2.41
RAB40C-201ENST00000248139 PCDH11XQ9BZA7 1347 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 PCDH11YQ9BZA8 1340 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 PFKFB2O60825 505 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 SCARF1Q14162 830 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 HELLSQ9NRZ9 838 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 CLSTN2Q9H4D0 955 aa30.11■■■□□ 2.41
RAB40C-201ENST00000248139 CCDC191Q8NCU4 936 aa30.1■■■□□ 2.41
RAB40C-201ENST00000248139 SMARCC2Q8TAQ2 1214 aa30.1■■■□□ 2.41
RAB40C-201ENST00000248139 PALLDQ8WX93 1383 aa30.1■■■□□ 2.41
RAB40C-201ENST00000248139 RNF113AO15541 343 aaKnown RBP30.1■■■□□ 2.41
RAB40C-201ENST00000248139 EXOSC10Q01780 885 aaKnown RBP30.1■■■□□ 2.41
RAB40C-201ENST00000248139 TAOK2Q9UL54 1235 aa30.1■■■□□ 2.41
RAB40C-201ENST00000248139 WDR17Q8IZU2 1322 aa30.1■■■□□ 2.41
RAB40C-201ENST00000248139 PTGS1P23219 599 aa30.09■■■□□ 2.41
RAB40C-201ENST00000248139 WASHC4Q2M389 1173 aa30.09■■■□□ 2.41
RAB40C-201ENST00000248139 GORABQ5T7V8 394 aa30.09■■■□□ 2.41
RAB40C-201ENST00000248139 BRINP3Q76B58 766 aa30.09■■■□□ 2.41
RAB40C-201ENST00000248139 PKD1L3Q7Z443 1732 aa30.09■■■□□ 2.41
RAB40C-201ENST00000248139 ADD1P35611 737 aaKnown RBP30.09■■■□□ 2.41
RAB40C-201ENST00000248139 OTUD7BQ6GQQ9 843 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms