RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 LRRC24Q50LG9 513 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 CCDC24Q8N4L8 307 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 LEO1Q8WVC0 666 aaPredicted RBP15.94■□□□□ 0.14
NCLN-201ENST00000246117 AKAP2Q9Y2D5 859 aa15.94■□□□□ 0.14
NCLN-201ENST00000246117 NEURL1BA8MQ27 555 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 A0A0U1RQG5 324 aaPredicted RBP15.93■□□□□ 0.14
NCLN-201ENST00000246117 IARSP41252 1262 aaKnown RBP15.93■□□□□ 0.14
NCLN-201ENST00000246117 DHX32Q7L7V1 743 aaKnown RBP15.93■□□□□ 0.14
NCLN-201ENST00000246117 ALG1Q9BT22 464 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
NCLN-201ENST00000246117 CBX8Q9HC52 389 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 hCG_1642624A0A1W2PR95 340 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 ANKRD18BA2A2Z9 1011 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 PI16Q6UXB8 463 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 NRBP1Q9UHY1 535 aa15.93■□□□□ 0.14
NCLN-201ENST00000246117 NAP1L1P55209 391 aaKnown RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 STX1AQ16623 288 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 PUS3Q9BZE2 481 aaKnown RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 DBNLQ9UJU6 430 aaKnown RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 PTCH1Q13635 1447 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 UVSSAQ2YD98 709 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 MTERF4Q7Z6M4 381 aaKnown RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 PI4K2BQ8TCG2 481 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 PHKBQ93100 1093 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 AATKQ6ZMQ8 1374 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 USP6P35125 1406 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 HMGB1P09429 215 aaKnown RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 MCM5P33992 734 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 AFMP43652 599 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 TNNT3P45378 269 aaPredicted RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 PPP1R9BQ96SB3 815 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 OSBPL3Q9H4L5 887 aa15.92■□□□□ 0.14
NCLN-201ENST00000246117 GPHNQ9NQX3 736 aaPredicted RBP15.92■□□□□ 0.14
NCLN-201ENST00000246117 SASH1O94885 1247 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 XBP1P17861 261 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 NCOA7Q8NI08 942 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 UBE2Q2Q8WVN8 375 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 CEP152O94986 1710 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 PNPLA6Q8IY17 1366 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 POLR3GO15318 223 aaPredicted RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 CMTR1Q8N1G2 835 aaKnown RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 GJB4Q9NTQ9 266 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 POLR1AO95602 1720 aaPredicted RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 ARHGEF10O15013 1369 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 B4E1Z4 1266 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 IL15P40933 162 aaPredicted RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 ANKRD20A12PQ8NF67 263 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 NOL10Q9BSC4 688 aaKnown RBP15.91■□□□□ 0.14
NCLN-201ENST00000246117 SLC52A2Q9HAB3 445 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
NCLN-201ENST00000246117 DYNC1I1O14576 645 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 TAF5LO75529 589 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 IPO7O95373 1038 aaKnown RBP15.9■□□□□ 0.14
NCLN-201ENST00000246117 STAP2Q9UGK3 403 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 IGHMBP2P38935 993 aaKnown RBP15.9■□□□□ 0.14
NCLN-201ENST00000246117 STX17P56962 302 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 IFNKQ9P0W0 207 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 SYKP43405 635 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 TEX35Q5T0J7 233 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 CEP135Q66GS9 1140 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 KIF18AQ8NI77 898 aa15.9■□□□□ 0.14
NCLN-201ENST00000246117 MRPS27Q92552 414 aaKnown RBP15.9■□□□□ 0.14
NCLN-201ENST00000246117 RIOK3O14730 519 aaKnown RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 TOP1P11387 765 aaKnown RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 ZFP91Q96JP5 570 aaPredicted RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 BRMS1Q9HCU9 246 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 PYCARDQ9ULZ3 195 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 PRDM1O75626 825 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 MAP3K12Q12852 859 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 UBXN4Q92575 508 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 QRICH2Q9H0J4 1663 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 RNF113AO15541 343 aaKnown RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 CDKL5O76039 1030 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 ZAP70P43403 619 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 DNAJC10Q8IXB1 793 aa15.89■□□□□ 0.13
NCLN-201ENST00000246117 NOC3LQ8WTT2 800 aaKnown RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 ZSCAN16Q9H4T2 348 aaPredicted RBP15.89■□□□□ 0.13
NCLN-201ENST00000246117 SPTLC2O15270 562 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 PPFIBP1Q86W92 1011 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 USP28Q96RU2 1077 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 DCAF5Q96JK2 942 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 TAF6LQ9Y6J9 622 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 SSBP05455 408 aaKnown RBP eCLIP15.88■□□□□ 0.13
NCLN-201ENST00000246117 CUL4AQ13619 759 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 ZHX3Q9H4I2 956 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 DNAI1Q9UI46 699 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 NEO1Q92859 1461 aa15.88■□□□□ 0.13
NCLN-201ENST00000246117 ZBTB43O43298 467 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 CYP21A2P08686 494 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 GPIHBP1Q8IV16 184 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 C19orf44Q9H6X5 657 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
NCLN-201ENST00000246117 PPRC1Q5VV67 1664 aaKnown RBP15.87■□□□□ 0.13
NCLN-201ENST00000246117 SNAP23O00161 211 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 DNA2P51530 1060 aa15.87■□□□□ 0.13
NCLN-201ENST00000246117 ZSWIM6Q9HCJ5 1215 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms