RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 NEUROD6Q96NK8 337 aa21.85■■□□□ 1.09
CHPF-201ENST00000243776 PDIA6Q15084 440 aa21.84■■□□□ 1.09
CHPF-201ENST00000243776 RBM43Q6ZSC3 357 aaKnown RBP21.84■■□□□ 1.09
CHPF-201ENST00000243776 NEURL1BA8MQ27 555 aa21.83■■□□□ 1.08
CHPF-201ENST00000243776 UTP14CQ5TAP6 766 aaKnown RBP21.83■■□□□ 1.08
CHPF-201ENST00000243776 AOPEPQ8N6M6 819 aa21.83■■□□□ 1.08
CHPF-201ENST00000243776 ZNF215Q9UL58 517 aaPredicted RBP21.83■■□□□ 1.08
CHPF-201ENST00000243776 CCDC69A6NI79 296 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 NEXNQ0ZGT2 675 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 ZNF771Q7L3S4 317 aaPredicted RBP21.82■■□□□ 1.08
CHPF-201ENST00000243776 GPHNQ9NQX3 736 aaPredicted RBP21.82■■□□□ 1.08
CHPF-201ENST00000243776 DDX21Q9NR30 783 aaKnown RBP eCLIP21.82■■□□□ 1.08
CHPF-201ENST00000243776 GCKRQ14397 625 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 TNNI3KQ59H18 835 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 ISM2Q6H9L7 571 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 HMG20BQ9P0W2 317 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 CFAP45Q9UL16 551 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 FPGT-TNNI3KV9GXZ4 949 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 PTPDC1A2A3K4 754 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 BIN1O00499 593 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 FSIP1Q8NA03 581 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 CTNNA3Q9UI47 895 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 AXIN2Q9Y2T1 843 aa21.82■■□□□ 1.08
CHPF-201ENST00000243776 ADD1P35611 737 aaKnown RBP21.81■■□□□ 1.08
CHPF-201ENST00000243776 ANKRD24Q8TF21 1146 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 A0A1B0GVL5 298 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 GOLIM4O00461 696 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 CTDNEP1O95476 244 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 CCDC73Q6ZRK6 1079 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 ZNF609O15014 1411 aa21.81■■□□□ 1.08
CHPF-201ENST00000243776 KINO60870 393 aaKnown RBP21.8■■□□□ 1.08
CHPF-201ENST00000243776 PTPN14Q15678 1187 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 NFATC2IPQ8NCF5 419 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 CHMP4AQ9BY43 222 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 GJB4Q9NTQ9 266 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 HDAC5Q9UQL6 1122 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 CRYBG1Q9Y4K1 1723 aa21.8■■□□□ 1.08
CHPF-201ENST00000243776 NSUN7Q8NE18 718 aaKnown RBP21.8■■□□□ 1.08
CHPF-201ENST00000243776 GTPBP4Q9BZE4 634 aaKnown RBP21.8■■□□□ 1.08
CHPF-201ENST00000243776 POLR3DP05423 398 aaPredicted RBP21.79■■□□□ 1.08
CHPF-201ENST00000243776 TIMM10P62072 90 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 STX1AQ16623 288 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.79■■□□□ 1.08
CHPF-201ENST00000243776 SDF4Q9BRK5 362 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 PTPN12Q05209 780 aaKnown RBP21.79■■□□□ 1.08
CHPF-201ENST00000243776 SNW1Q13573 536 aaKnown RBP21.79■■□□□ 1.08
CHPF-201ENST00000243776 KRT32Q14532 448 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 MCMDC2Q4G0Z9 681 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 TTLL5Q6EMB2 1281 aa21.79■■□□□ 1.08
CHPF-201ENST00000243776 RGPD2P0DJD1 1756 aa21.78■■□□□ 1.08
CHPF-201ENST00000243776 N4BP2Q86UW6 1770 aaPredicted RBP21.78■■□□□ 1.08
CHPF-201ENST00000243776 PTPN21Q16825 1174 aa21.78■■□□□ 1.08
CHPF-201ENST00000243776 DHX40Q8IX18 779 aaKnown RBP21.78■■□□□ 1.08
CHPF-201ENST00000243776 GCP02774 474 aa21.78■■□□□ 1.08
CHPF-201ENST00000243776 ZC3H6P61129 1189 aaKnown RBP21.78■■□□□ 1.08
CHPF-201ENST00000243776 SNRKQ9NRH2 765 aa21.78■■□□□ 1.08
CHPF-201ENST00000243776 ATP5JP18859 108 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 ELF2Q15723 593 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 A0A0U1RQG5 324 aaPredicted RBP21.77■■□□□ 1.08
CHPF-201ENST00000243776 USPL1Q5W0Q7 1092 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 ORAI2Q96SN7 254 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 ZSCAN16Q9H4T2 348 aaPredicted RBP21.77■■□□□ 1.08
CHPF-201ENST00000243776 OGFRQ9NZT2 677 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 PAXBP1Q9Y5B6 917 aa21.77■■□□□ 1.08
CHPF-201ENST00000243776 U3KPZ7 1027 aaPredicted RBP21.77■■□□□ 1.08
CHPF-201ENST00000243776 HAND2P61296 217 aa21.77■■□□□ 1.07
CHPF-201ENST00000243776 AMOTQ4VCS5 1084 aa21.77■■□□□ 1.07
CHPF-201ENST00000243776 SMC2O95347 1197 aa21.76■■□□□ 1.07
CHPF-201ENST00000243776 TSGA10IPQ3SY00 556 aa21.76■■□□□ 1.07
CHPF-201ENST00000243776 ST7Q9NRC1 585 aa21.76■■□□□ 1.07
CHPF-201ENST00000243776 A0A087WZG4 1122 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 KMT5BQ4FZB7 885 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 HSP90AB3PQ58FF7 597 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 ZNF790Q6PG37 636 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 ANKRD13DQ6ZTN6 518 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 ZNF496Q96IT1 587 aaPredicted RBP21.75■■□□□ 1.07
CHPF-201ENST00000243776 RCOR1Q9UKL0 485 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 CCZ1BP86790 482 aa21.75■■□□□ 1.07
CHPF-201ENST00000243776 CCZ1P86791 482 aaPredicted RBP21.75■■□□□ 1.07
CHPF-201ENST00000243776 THEMISQ8N1K5 641 aaPredicted RBP21.75■■□□□ 1.07
CHPF-201ENST00000243776 ALDH8A1Q9H2A2 487 aaPredicted RBP21.75■■□□□ 1.07
CHPF-201ENST00000243776 DHX32Q7L7V1 743 aaKnown RBP21.74■■□□□ 1.07
CHPF-201ENST00000243776 ILDR1Q86SU0 546 aaPredicted RBP21.74■■□□□ 1.07
CHPF-201ENST00000243776 GORABQ5T7V8 394 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 LMBR1LQ6UX01 489 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 LRRN4CLQ8ND94 238 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 PFKFB2O60825 505 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 PDIA4P13667 645 aaKnown RBP21.74■■□□□ 1.07
CHPF-201ENST00000243776 SF3A1Q15459 793 aaKnown RBP21.74■■□□□ 1.07
CHPF-201ENST00000243776 CGNQ9P2M7 1197 aaKnown RBP21.74■■□□□ 1.07
CHPF-201ENST00000243776 PCDHA7Q9UN72 937 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 UTYO14607 1347 aa21.74■■□□□ 1.07
CHPF-201ENST00000243776 DPCR1Q3MIW9 517 aa21.73■■□□□ 1.07
CHPF-201ENST00000243776 FEZ1Q99689 392 aa21.73■■□□□ 1.07
CHPF-201ENST00000243776 METTL22Q9BUU2 404 aaPredicted RBP21.73■■□□□ 1.07
CHPF-201ENST00000243776 RFX5P48382 616 aaPredicted RBP21.73■■□□□ 1.07
CHPF-201ENST00000243776 NDUFA8P51970 172 aa21.73■■□□□ 1.07
CHPF-201ENST00000243776 SMARCC2Q8TAQ2 1214 aa21.73■■□□□ 1.07
CHPF-201ENST00000243776 NLRP2Q9NX02 1062 aa21.73■■□□□ 1.07
CHPF-201ENST00000243776 LTN1O94822 1766 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms