RNA–Protein interactions for RNA: ENST00000231484.3

PCDH12-201, Transcript of protocadherin 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH12, Length 6,562 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH12-201ENST00000231484 CASKIN1Q8WXD9 1431 aa13.27□□□□□ -0.28
PCDH12-201ENST00000231484 RPUSD2Q8IZ73 545 aaKnown RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 AKR1B15C9JRZ8 316 aaPredicted RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 CASQ2O14958 399 aaPredicted RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 CTNNA2P26232 953 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 NEK1Q96PY6 1258 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 BOLA2Q9H3K6 86 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 TLDC2A0PJX2 215 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 RFC1P35251 1148 aaPredicted RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 ESCO1Q5FWF5 840 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 CNGA4Q8IV77 575 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 DDX27Q96GQ7 796 aaKnown RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.29
PCDH12-201ENST00000231484 DDX23Q9BUQ8 820 aaKnown RBP13.27□□□□□ -0.29
PCDH12-201ENST00000231484 FRMD3A2A2Y4 597 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 ORC3Q9UBD5 711 aaPredicted RBP13.26□□□□□ -0.29
PCDH12-201ENST00000231484 GOLGA8AA7E2F4 631 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 PRPHP41219 470 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 PLVAPQ9BX97 442 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 ATAD2BQ9ULI0 1458 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 E7EVH7 732 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 ATP5DP30049 168 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 RAB11FIP4Q86YS3 637 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
PCDH12-201ENST00000231484 TTF2Q9UNY4 1162 aaKnown RBP13.26□□□□□ -0.29
PCDH12-201ENST00000231484 SLC12A7Q9Y666 1083 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 RAD50Q92878 1312 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 ICE2Q659A1 982 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 CCDC110Q8TBZ0 833 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 LMBR1Q8WVP7 490 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 SLC12A5Q9H2X9 1139 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 ELP1O95163 1332 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 FANCD2Q9BXW9 1451 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 TPX2Q9ULW0 747 aaKnown RBP13.26□□□□□ -0.29
PCDH12-201ENST00000231484 USP16Q9Y5T5 823 aa13.26□□□□□ -0.29
PCDH12-201ENST00000231484 KRT13P13646 458 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 CFAP70Q5T0N1 1121 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 SREK1Q8WXA9 508 aaKnown RBP13.25□□□□□ -0.29
PCDH12-201ENST00000231484 PHF23Q9BUL5 403 aaPredicted RBP13.25□□□□□ -0.29
PCDH12-201ENST00000231484 MTRF1LQ9UGC7 380 aaKnown RBP13.25□□□□□ -0.29
PCDH12-201ENST00000231484 ATAD2Q6PL18 1390 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 PDE1CQ14123 709 aaPredicted RBP13.25□□□□□ -0.29
PCDH12-201ENST00000231484 PHLDB2Q86SQ0 1253 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 LMBRD1Q9NUN5 540 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 MCTP2Q6DN12 878 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 CBX8Q9HC52 389 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 GNGT1P63211 74 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 GBP7Q8N8V2 638 aaPredicted RBP13.25□□□□□ -0.29
PCDH12-201ENST00000231484 CCDC42Q96M95 316 aa13.25□□□□□ -0.29
PCDH12-201ENST00000231484 LRRD1A4D1F6 860 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 PFDN1O60925 122 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 PUS7Q96PZ0 661 aaKnown RBP13.24□□□□□ -0.29
PCDH12-201ENST00000231484 NKIRAS1Q9NYS0 192 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 PPP1R1BQ9UD71 204 aaPredicted RBP13.24□□□□□ -0.29
PCDH12-201ENST00000231484 SMIM24O75264 130 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 RUFY4Q6ZNE9 571 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 RAB34Q9BZG1 259 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 CETN3O15182 167 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 ERCC6LQ2NKX8 1250 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 CCDC122Q5T0U0 273 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 WWC2Q6AWC2 1192 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 FAM71BQ8TC56 605 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 TBC1D31Q96DN5 1066 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 ATP8B1O43520 1251 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 IDEP14735 1019 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 C8orf74Q6P047 294 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 APBB1IPQ7Z5R6 666 aaPredicted RBP13.24□□□□□ -0.29
PCDH12-201ENST00000231484 PAF1Q8N7H5 531 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 AIDAQ96BJ3 306 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 TACO1Q9BSH4 297 aaKnown RBP13.24□□□□□ -0.29
PCDH12-201ENST00000231484 IFT20Q8IY31 132 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 ZNF215Q9UL58 517 aaPredicted RBP13.24□□□□□ -0.29
PCDH12-201ENST00000231484 SMARCA4P51532 1647 aa13.24□□□□□ -0.29
PCDH12-201ENST00000231484 LRRC45Q96CN5 670 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 A0A087WUV0 522 aaPredicted RBP13.23□□□□□ -0.29
PCDH12-201ENST00000231484 MYL5Q02045 173 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 TMEM266Q2M3C6 531 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 SPTY2D1Q68D10 685 aaPredicted RBP13.23□□□□□ -0.29
PCDH12-201ENST00000231484 PRAM1Q96QH2 718 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ODF2LQ9ULJ1 636 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 GOLGA8KD6RF30 607 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ACTN2P35609 894 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 IARSP41252 1262 aaKnown RBP13.23□□□□□ -0.29
PCDH12-201ENST00000231484 MUM1Q2TAK8 710 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 TRIM68Q6AZZ1 485 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 EFCAB8A8MWE9 144 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ZBTB17Q13105 803 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 PTPRCP08575 1304 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ARAP1Q96P48 1450 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 KIAA1524Q8TCG1 905 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 LRRC23Q53EV4 343 aaPredicted RBP13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ARHGEF2Q92974 986 aaKnown RBP13.23□□□□□ -0.29
PCDH12-201ENST00000231484 TSNARE1Q96NA8 513 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 MED4Q9NPJ6 270 aa13.23□□□□□ -0.29
PCDH12-201ENST00000231484 ARHGAP5Q13017 1502 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms