RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 KCNA6P17658 529 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 DHX32Q7L7V1 743 aaKnown RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 NCOA7Q8NI08 942 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 ZDHHC9Q9Y397 364 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 KDM5DQ9BY66 1539 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 KIF5CO60282 957 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 SNRPA1P09661 255 aaKnown RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 BMS1Q14692 1282 aaKnown RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 KIAA1328Q86T90 577 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 NUP88Q99567 741 aaPredicted RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 LZTFL1Q9NQ48 299 aa15.88■□□□□ 0.13
NFKB1-201ENST00000226574 CWC25Q9NXE8 425 aaPredicted RBP15.88■□□□□ 0.13
NFKB1-201ENST00000226574 ZNF75DP51815 510 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 KRT28Q7Z3Y7 464 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 ZFYVE9O95405 1425 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 EPS15P42566 896 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 SLC9C2Q5TAH2 1124 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 NBPF6Q5VWK0 638 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 NBPF4Q96M43 638 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 PHF23Q9BUL5 403 aaPredicted RBP15.87■□□□□ 0.13
NFKB1-201ENST00000226574 AKAP2Q9Y2D5 859 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 TAF3Q5VWG9 929 aa15.87■□□□□ 0.13
NFKB1-201ENST00000226574 FTOQ9C0B1 505 aaKnown RBP eCLIP15.87■□□□□ 0.13
NFKB1-201ENST00000226574 ZKSCAN3Q9BRR0 538 aa15.86■□□□□ 0.13
NFKB1-201ENST00000226574 MATR3P43243 847 aaKnown RBP eCLIP15.86■□□□□ 0.131e-7■■■□□ 15.4
NFKB1-201ENST00000226574 MAP3K5Q99683 1374 aa15.86■□□□□ 0.13
NFKB1-201ENST00000226574 SETQ01105 290 aaPredicted RBP15.86■□□□□ 0.13
NFKB1-201ENST00000226574 AKAP4Q5JQC9 854 aa15.86■□□□□ 0.13
NFKB1-201ENST00000226574 SSH3Q8TE77 659 aa15.86■□□□□ 0.13
NFKB1-201ENST00000226574 SSRP1Q08945 709 aaKnown RBP15.85■□□□□ 0.13
NFKB1-201ENST00000226574 CCDC181Q5TID7 509 aa15.85■□□□□ 0.13
NFKB1-201ENST00000226574 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
NFKB1-201ENST00000226574 CDK5RAP3Q96JB5 506 aa15.85■□□□□ 0.13
NFKB1-201ENST00000226574 PUF60Q9UHX1 559 aaKnown RBP15.85■□□□□ 0.13
NFKB1-201ENST00000226574 EIF3JO75822 258 aaKnown RBP15.85■□□□□ 0.13
NFKB1-201ENST00000226574 CAVIN2O95810 425 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 MYL10Q9BUA6 226 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 TLR7Q9NYK1 1049 aaKnown RBP15.84■□□□□ 0.13
NFKB1-201ENST00000226574 PRAMEF22A3QJZ6 481 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 PROSER3Q2NL68 480 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 ZBTB43O43298 467 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 GCP02774 474 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 IKQ13123 557 aaPredicted RBP15.84■□□□□ 0.13
NFKB1-201ENST00000226574 KCNG4Q8TDN1 519 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 ZNF853P0CG23 659 aa15.84■□□□□ 0.13
NFKB1-201ENST00000226574 N4BP3O15049 544 aa15.83■□□□□ 0.12
NFKB1-201ENST00000226574 CLSTN2Q9H4D0 955 aa15.83■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF215Q9UL58 517 aaPredicted RBP15.83■□□□□ 0.12
NFKB1-201ENST00000226574 USP28Q96RU2 1077 aa15.83■□□□□ 0.12
NFKB1-201ENST00000226574 TTC21AQ8NDW8 1320 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 USP5P45974 858 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 MAP3K12Q12852 859 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 GPIHBP1Q8IV16 184 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 CCDC150Q8NCX0 1101 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 DHX58Q96C10 678 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 CRACR2AQ9BSW2 395 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 DDX21Q9NR30 783 aaKnown RBP eCLIP15.82■□□□□ 0.12
NFKB1-201ENST00000226574 RNMTO43148 476 aaKnown RBP15.82■□□□□ 0.12
NFKB1-201ENST00000226574 EIF4A1P60842 406 aaKnown RBP15.82■□□□□ 0.12
NFKB1-201ENST00000226574 FAM160A1Q05DH4 1040 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 STIM1Q13586 685 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 NAA30Q147X3 362 aaPredicted RBP15.82■□□□□ 0.12
NFKB1-201ENST00000226574 FAM89AQ96GI7 184 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 TMOD3Q9NYL9 352 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 PHKBQ93100 1093 aa15.82■□□□□ 0.12
NFKB1-201ENST00000226574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 SMAP1Q8IYB5 467 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 LSG1Q9H089 658 aaKnown RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 ARFGAP3Q9NP61 516 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 CALCOCO1Q9P1Z2 691 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 SAMD9LQ8IVG5 1584 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 PRDM15P57071 1507 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 STARD3NLO95772 234 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 KRT18P05783 430 aaKnown RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 ZNF397Q8NF99 534 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 WASF1Q92558 559 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 CARD6Q9BX69 1037 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 TMX4Q9H1E5 349 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 RHOXF2BP0C7M4 288 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 PPARDQ03181 441 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 CUL4AQ13619 759 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 ATP2B3Q16720 1220 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 ERCC6LQ2NKX8 1250 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 TNNI3KQ59H18 835 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 MIGA1Q8NAN2 632 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 BBXQ8WY36 941 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 RHOXF2Q9BQY4 288 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 FPGT-TNNI3KV9GXZ4 949 aa15.81■□□□□ 0.12
NFKB1-201ENST00000226574 EDC4Q6P2E9 1401 aaKnown RBP15.81■□□□□ 0.12
NFKB1-201ENST00000226574 UHRF1BP1LA0JNW5 1464 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 MFSD6Q6ZSS7 791 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 ORAI2Q96SN7 254 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 GNL3LQ9NVN8 582 aaKnown RBP15.8■□□□□ 0.12
NFKB1-201ENST00000226574 MAPK8IP1Q9UQF2 711 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 POGZQ7Z3K3 1410 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 PBRM1Q86U86 1689 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 SYNMO15061 1565 aa15.8■□□□□ 0.12
NFKB1-201ENST00000226574 NLRP5P59047 1200 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms