RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 CCDC175P0C221 793 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 CCDC102BQ68D86 513 aa12.66□□□□□ -0.38
KNOP1-201ENST00000219837 LMOD1P29536 600 aaPredicted RBP12.65□□□□□ -0.38
KNOP1-201ENST00000219837 SNW1Q13573 536 aaKnown RBP12.65□□□□□ -0.38
KNOP1-201ENST00000219837 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■■■□ 21.3
KNOP1-201ENST00000219837 TNRQ92752 1358 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 KIAA0753Q2KHM9 967 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 XAGE3Q8WTP9 111 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 TFCP2L1Q9NZI6 479 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 ADCY5O95622 1261 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 Q6ZUG5 572 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 USP37Q86T82 979 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 NECAB1Q8N987 351 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 ESR2Q92731 530 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 SIRT1Q96EB6 747 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 RBM17Q96I25 401 aaKnown RBP12.65□□□□□ -0.38
KNOP1-201ENST00000219837 SYKP43405 635 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 SLC39A6Q13433 755 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 CCDC50Q8IVM0 306 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
KNOP1-201ENST00000219837 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 MAGEB6Q8N7X4 407 aa12.65□□□□□ -0.38
KNOP1-201ENST00000219837 WDR7Q9Y4E6 1490 aa12.65□□□□□ -0.39
KNOP1-201ENST00000219837 DZIP3Q86Y13 1208 aaKnown RBP12.64□□□□□ -0.39
KNOP1-201ENST00000219837 KRT2P35908 639 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 PRDM10Q9NQV6 1147 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 BIN2Q9UBW5 565 aaPredicted RBP12.64□□□□□ -0.39
KNOP1-201ENST00000219837 RASAL2Q9UJF2 1139 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 RTL9Q8NET4 1388 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 DHX29Q7Z478 1369 aaKnown RBP12.64□□□□□ -0.39
KNOP1-201ENST00000219837 TAF12Q16514 161 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 GJA3Q9Y6H8 435 aa12.64□□□□□ -0.39
KNOP1-201ENST00000219837 ATP2B3Q16720 1220 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 APBB1IPQ7Z5R6 666 aaPredicted RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ZSCAN30Q86W11 494 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 CEP112Q8N8E3 955 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ESPNB1AK53 854 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 N4BP3O15049 544 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 HSP90AA4PQ58FG1 418 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 SAP30BPQ9UHR5 308 aaKnown RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 SPDYE3A6NKU9 549 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 TOM1O60784 492 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 RBM25P49756 843 aaKnown RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 JAG2Q9Y219 1238 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 LAMC3Q9Y6N6 1575 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 NEMFO60524 1076 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 DDB1Q16531 1140 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 MCMDC2Q4G0Z9 681 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 CCDC63Q8NA47 563 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 BBXQ8WY36 941 aaPredicted RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ANKRD36BQ8N2N9 1353 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 SELENOOQ9BVL4 669 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 RTCBQ9Y3I0 505 aaKnown RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 DISP3Q9P2K9 1392 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 DDX12PQ92771 950 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 SMARCC1Q92922 1105 aaPredicted RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ZSCAN16Q9H4T2 348 aaPredicted RBP12.63□□□□□ -0.39
KNOP1-201ENST00000219837 C6orf50Q9HD87 102 aa12.63□□□□□ -0.39
KNOP1-201ENST00000219837 ASIC1P78348 528 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 RAB3IL1Q8TBN0 382 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 IMPG2Q9BZV3 1241 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 NBPF7P0C2Y1 421 aaPredicted RBP12.62□□□□□ -0.39
KNOP1-201ENST00000219837 FBLN1P23142 703 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 UBASH3AP57075 661 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 SP4Q02446 784 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 CTAGE1Q96RT6 745 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 B4DLN1 442 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 MRPL12P52815 198 aaKnown RBP12.62□□□□□ -0.39
KNOP1-201ENST00000219837 MXRA7P84157 204 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 ARID5AQ03989 594 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 IDI1Q13907 227 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 COPS6Q7L5N1 327 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 MIGA1Q8NAN2 632 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 TRAF1Q13077 416 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 C6orf163Q5TEZ5 329 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 CKAP4Q07065 602 aaKnown RBP12.62□□□□□ -0.39
KNOP1-201ENST00000219837 MAPK8IP2Q13387 824 aaPredicted RBP12.62□□□□□ -0.39
KNOP1-201ENST00000219837 EHBP1Q8NDI1 1231 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 ZSWIM4Q9H7M6 989 aa12.62□□□□□ -0.39
KNOP1-201ENST00000219837 MCM7P33993 719 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 PROCA1Q8NCQ7 364 aaPredicted RBP12.61□□□□□ -0.39
KNOP1-201ENST00000219837 PAG1Q9NWQ8 432 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 NBPF14Q5TI25 921 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 SPECC1LQ69YQ0 1117 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 TMTC2Q8N394 836 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 DHX58Q96C10 678 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 TCHPQ9BT92 498 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 CNPY2Q9Y2B0 182 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 ZFYP08048 801 aaPredicted RBP12.61□□□□□ -0.39
KNOP1-201ENST00000219837 MARCKSP29966 332 aaPredicted RBP12.61□□□□□ -0.39
KNOP1-201ENST00000219837 GRIN2AQ12879 1464 aa12.61□□□□□ -0.39
KNOP1-201ENST00000219837 GOLGA6L9A6NEM1 432 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms