RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 HDAC9Q9UKV0 1011 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ARHGEF10O15013 1369 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 MAP3K5Q99683 1374 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ERICH4A6NGS2 130 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 GOLGA8AA7E2F4 631 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 HMGB1P1B2RPK0 211 aaPredicted RBP5.03□□□□□ -1.6
CHD9-201ENST00000219084 PDE1AP54750 535 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 MCMDC2Q4G0Z9 681 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 C20orf194Q5TEA3 1177 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TAX1BP1Q86VP1 789 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 FAM177A1Q8N128 213 aaPredicted RBP5.03□□□□□ -1.6
CHD9-201ENST00000219084 SETBP1Q9Y6X0 1596 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 FSD2A1L4K1 749 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 SKILP12757 684 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 CCDC184Q52MB2 194 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 POTEDQ86YR6 584 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 MKRN1Q9UHC7 482 aaKnown RBP5.03□□□□□ -1.6
CHD9-201ENST00000219084 KIAA0232Q92628 1395 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ARAP3Q8WWN8 1544 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ATP7BP35670 1465 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 KDM2BQ8NHM5 1336 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TACC1O75410 805 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 LDHCP07864 332 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 USP5P45974 858 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ERO1AQ96HE7 468 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 GLT8D2Q9H1C3 349 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TMOD2Q9NZR1 351 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 PSMA7O14818 248 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 SDSP20132 328 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TYRO3Q06418 890 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ANO6Q4KMQ2 910 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TOM1L2Q6ZVM7 507 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 CCDC77Q9BR77 488 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TMOD3Q9NYL9 352 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 RAI14Q9P0K7 980 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 TSKSQ9UJT2 592 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 PTPRKQ15262 1439 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 MAP2P11137 1827 aaKnown RBP5.03□□□□□ -1.6
CHD9-201ENST00000219084 MYL6BP14649 208 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 RRS1Q15050 365 aaKnown RBP5.03□□□□□ -1.6
CHD9-201ENST00000219084 FRMPD1Q5SYB0 1578 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 KDM4AO75164 1064 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ATP8B2P98198 1209 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 NUTM1Q86Y26 1132 aa5.03□□□□□ -1.6
CHD9-201ENST00000219084 ATP2B1P20020 1258 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 MTIF2P46199 727 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 VWA3BQ502W6 1294 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 CCDC129Q6ZRS4 1044 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 RUFY3Q7L099 469 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 MRPL50Q8N5N7 158 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 ATP2A1O14983 1001 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IDH1O75874 414 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 NBPF11Q86T75 865 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 USP48Q86UV5 1035 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 PROSER2Q86WR7 435 aaPredicted RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 NUTM2AQ8IVF1 878 aaPredicted RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 CNKSR2Q8WXI2 1034 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 SEPT11Q9NVA2 429 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 ASXL2Q76L83 1435 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 ZCCHC11Q5TAX3 1644 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 CBX1P83916 185 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 TMEM67Q5HYA8 995 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 FCHSD1Q86WN1 690 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 JADE2Q9NQC1 790 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 PODXL2Q9NZ53 605 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 ABCA8O94911 1581 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 EBAG9O00559 213 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IFIT3O14879 490 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 MAP4K4O95819 1239 aaPredicted RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 SYT1P21579 422 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IL15P40933 162 aaPredicted RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 GNG11P61952 73 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 ESR2Q92731 530 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 HELLSQ9NRZ9 838 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 TTF2Q9UNY4 1162 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 NEO1Q92859 1461 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 RNF17Q9BXT8 1623 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 RBM26Q5T8P6 1007 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 ZBTB40Q9NUA8 1239 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IKBKGQ9Y6K9 419 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 USH1CQ9Y6N9 552 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 SNRPA1P09661 255 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 UBA7P41226 1012 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 PPP2R5EQ16537 467 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 MSL1Q68DK7 614 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 DZIP1Q86YF9 867 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 CRNKL1Q9BZJ0 848 aaKnown RBP5.02□□□□□ -1.61
CHD9-201ENST00000219084 MKNK2Q9HBH9 465 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 TNRQ92752 1358 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 ABCA9Q8IUA7 1624 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 GSTTP1A0A1W2PQM5 241 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 PLCG2P16885 1265 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 KIAA0753Q2KHM9 967 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 PPP1R42Q7Z4L9 355 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 MYRIPQ8NFW9 859 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IFT74Q96LB3 600 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 NUP58Q9BVL2 599 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 IL1RAPL2Q9NP60 686 aa5.02□□□□□ -1.61
CHD9-201ENST00000219084 STAT6P42226 847 aa5.01□□□□□ -1.61
CHD9-201ENST00000219084 FAM160A1Q05DH4 1040 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms