RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 KCNG1Q9UIX4 513 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
USP11-201ENST00000218348 TAOK2Q9UL54 1235 aa11.99□□□□□ -0.49
USP11-201ENST00000218348 PPFIA3O75145 1194 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
USP11-201ENST00000218348 AFDNP55196 1824 aaKnown RBP11.98□□□□□ -0.49
USP11-201ENST00000218348 AKT1S1Q96B36 256 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 TBC1D2BQ9UPU7 963 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 TMEM51Q9NW97 253 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 CWC25Q9NXE8 425 aaPredicted RBP11.98□□□□□ -0.49
USP11-201ENST00000218348 RBM27Q9P2N5 1060 aaKnown RBP11.98□□□□□ -0.49
USP11-201ENST00000218348 CIZ1Q9ULV3 898 aaPredicted RBP11.98□□□□□ -0.49
USP11-201ENST00000218348 HDAC5Q9UQL6 1122 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
USP11-201ENST00000218348 DDX60Q8IY21 1712 aaKnown RBP11.97□□□□□ -0.49
USP11-201ENST00000218348 GOLGA6L22H0YM25 854 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 KCNQ4P56696 695 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 CAVIN1Q6NZI2 390 aaKnown RBP11.97□□□□□ -0.49
USP11-201ENST00000218348 NECAB1Q8N987 351 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 UPF1Q92900 1129 aaKnown RBP eCLIP11.97□□□□□ -0.49
USP11-201ENST00000218348 ERBB4Q15303 1308 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 HSPA4P34932 840 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 AK2P54819 239 aa11.97□□□□□ -0.49
USP11-201ENST00000218348 ZNF589Q86UQ0 364 aaPredicted RBP11.97□□□□□ -0.49
USP11-201ENST00000218348 SMARCC1Q92922 1105 aaPredicted RBP11.97□□□□□ -0.49
USP11-201ENST00000218348 STK3Q13188 491 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 HSP90AB3PQ58FF7 597 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 SLC27A3Q5K4L6 730 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 GOLGB1Q14789 3259 aaKnown RBP11.96□□□□□ -0.49
USP11-201ENST00000218348 KIAA1551Q9HCM1 1747 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 LARGE1O95461 756 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 XRCC6P12956 609 aaKnown RBP eCLIP11.96□□□□□ -0.49
USP11-201ENST00000218348 TNNI3KQ59H18 835 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 GAS2L3Q86XJ1 694 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 RBM8AQ9Y5S9 174 aaKnown RBP11.96□□□□□ -0.49
USP11-201ENST00000218348 FPGT-TNNI3KV9GXZ4 949 aa11.96□□□□□ -0.49
USP11-201ENST00000218348 TTC41PQ6P2S7 1318 aa11.96□□□□□ -0.5
USP11-201ENST00000218348 RAD50Q92878 1312 aa11.96□□□□□ -0.5
USP11-201ENST00000218348 CCDC83Q8IWF9 413 aa11.96□□□□□ -0.5
USP11-201ENST00000218348 EVI5LQ96CN4 794 aa11.96□□□□□ -0.5
USP11-201ENST00000218348 GOLIM4O00461 696 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 HLFQ16534 295 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 RC3H1Q5TC82 1133 aaKnown RBP11.95□□□□□ -0.5
USP11-201ENST00000218348 SMIM5Q71RC9 77 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 KIF13BQ9NQT8 1826 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 NUCB2P80303 420 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 TEX2Q8IWB9 1127 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 RUFY2Q8WXA3 655 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 LRRC2Q9BYS8 371 aa11.95□□□□□ -0.5
USP11-201ENST00000218348 RFX5P48382 616 aaPredicted RBP11.94□□□□□ -0.5
USP11-201ENST00000218348 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
USP11-201ENST00000218348 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 CERS3Q8IU89 383 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 EIF5P55010 431 aaKnown RBP11.94□□□□□ -0.5
USP11-201ENST00000218348 TXNRD1Q16881 649 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 GORABQ5T7V8 394 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 NSFL1CQ9UNZ2 370 aaKnown RBP11.94□□□□□ -0.5
USP11-201ENST00000218348 AOX1Q06278 1338 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 CRKLP46109 303 aaKnown RBP11.94□□□□□ -0.5
USP11-201ENST00000218348 FOSBP53539 338 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 FOXO4P98177 505 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
USP11-201ENST00000218348 RUFY3Q7L099 469 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 UTYO14607 1347 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 ZBTB1Q9Y2K1 713 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 ZBTB22O15209 634 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 PI16Q6UXB8 463 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 COPRSQ9NQ92 184 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 PDRG1Q9NUG6 133 aa11.93□□□□□ -0.5
USP11-201ENST00000218348 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 SNAP23O00161 211 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 ATP6V1AP38606 617 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 EZH2Q15910 746 aaKnown RBP11.92□□□□□ -0.5
USP11-201ENST00000218348 CREB3L3Q68CJ9 461 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 HELBQ8NG08 1087 aaPredicted RBP11.92□□□□□ -0.5
USP11-201ENST00000218348 ANP32BQ92688 251 aaKnown RBP11.92□□□□□ -0.5
USP11-201ENST00000218348 ADORA1P30542 326 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 CCDC57Q2TAC2 916 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 ANKRD31Q8N7Z5 1873 aa11.92□□□□□ -0.5
USP11-201ENST00000218348 A0A0G2JLW4 131 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 ZKSCAN1P17029 563 aaPredicted RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 CASP7P55210 303 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 TEX13AQ9BXU3 409 aaPredicted RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 TNRC6CQ9HCJ0 1690 aaKnown RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 VPS37CA5D8V6 355 aaPredicted RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 H7C1W4 665 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 APBA3O96018 575 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 ANAPC15P60006 121 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 FERMT3Q86UX7 667 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 CWC22Q9HCG8 908 aaKnown RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 CCNL1Q9UK58 526 aaPredicted RBP11.91□□□□□ -0.5
USP11-201ENST00000218348 STARD3NLO95772 234 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 CHST3Q7LGC8 479 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 BCL2L12Q9HB09 334 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 CYP46A1Q9Y6A2 500 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 COL4A1P02462 1669 aa11.91□□□□□ -0.5
USP11-201ENST00000218348 A0A1B0GUL7 405 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 VPS53Q5VIR6 699 aa11.9□□□□□ -0.5
USP11-201ENST00000218348 ATG9AQ7Z3C6 839 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms