RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 WTAPQ15007 396 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 CAGE1Q8TC20 777 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 ESR2Q92731 530 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 MKRN3Q13064 507 aaKnown RBP15.95■□□□□ 0.14
SIX4-201ENST00000216513 NCOA7Q8NI08 942 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 ZSCAN31Q96LW9 406 aaPredicted RBP15.95■□□□□ 0.14
SIX4-201ENST00000216513 CNGA1P29973 690 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 GJD4Q96KN9 370 aaPredicted RBP15.95■□□□□ 0.14
SIX4-201ENST00000216513 TCP10L2B9ZVM9 353 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 SERPINB2P05120 415 aa15.95■□□□□ 0.14
SIX4-201ENST00000216513 GDPD2Q9HCC8 539 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 SSR1P43307 286 aaKnown RBP15.94■□□□□ 0.14
SIX4-201ENST00000216513 PUS7Q96PZ0 661 aaKnown RBP15.94■□□□□ 0.14
SIX4-201ENST00000216513 DNMT1P26358 1616 aaKnown RBP15.94■□□□□ 0.14
SIX4-201ENST00000216513 ZBTB21Q9ULJ3 1066 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 HMGB1P09429 215 aaKnown RBP15.94■□□□□ 0.14
SIX4-201ENST00000216513 GADL1Q6ZQY3 521 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 PAGR1Q9BTK6 254 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 TSPY26PQ9H489 355 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 CCDC39Q9UFE4 941 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 IL16Q14005 1332 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 TSPYL6Q8N831 410 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 C8orf76Q96K31 380 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 SLC26A6Q9BXS9 759 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 PAG1Q9NWQ8 432 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 SBNO2Q9Y2G9 1366 aa15.94■□□□□ 0.14
SIX4-201ENST00000216513 RFX1P22670 979 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 KIAA0825Q8IV33 1275 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 CCDC191Q8NCU4 936 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 MNS1Q8NEH6 495 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 RIMBP3CA6NJZ7 1639 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 RIMBP3BA6NNM3 1639 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 RIMBP3Q9UFD9 1639 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
SIX4-201ENST00000216513 PPP1R12BO60237 982 aaPredicted RBP15.93■□□□□ 0.14
SIX4-201ENST00000216513 DTNBO60941 627 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 CALM1P0DP23 149 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 CALM2P0DP24 149 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 CALM3P0DP25 149 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 TRAF1Q13077 416 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 USP48Q86UV5 1035 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 CCDC150Q8NCX0 1101 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 KRT23Q9C075 422 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 ARHGEF10LQ9HCE6 1279 aa15.93■□□□□ 0.14
SIX4-201ENST00000216513 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 PUM3Q15397 648 aaKnown RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 CCDC178Q5BJE1 867 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 PKD2L1Q9P0L9 805 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 TTF2Q9UNY4 1162 aaKnown RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 ZFYP08048 801 aaPredicted RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 SCNN1DP51172 638 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 RPS8P62241 208 aaKnown RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 SPON1Q9HCB6 807 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 JCADQ9P266 1359 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 KDM5CP41229 1560 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 IL13P35225 146 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 METAP2P50579 478 aaKnown RBP eCLIP15.92■□□□□ 0.14
SIX4-201ENST00000216513 BACH2Q9BYV9 841 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 ABCA8O94911 1581 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 USP16Q9Y5T5 823 aa15.92■□□□□ 0.14
SIX4-201ENST00000216513 RDXP35241 583 aaKnown RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 BRDTQ58F21 947 aaPredicted RBP15.92■□□□□ 0.14
SIX4-201ENST00000216513 SAMD9LQ8IVG5 1584 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 MMP10P09238 476 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
SIX4-201ENST00000216513 ISM2Q6H9L7 571 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 TNNQ9UQP3 1299 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 WDR17Q8IZU2 1322 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 ERFEQ4G0M1 354 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 IARSP41252 1262 aaKnown RBP15.91■□□□□ 0.14
SIX4-201ENST00000216513 TNFAIP1Q13829 316 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 DEF6Q9H4E7 631 aa15.91■□□□□ 0.14
SIX4-201ENST00000216513 AATFQ9NY61 560 aaKnown RBP eCLIP15.91■□□□□ 0.14
SIX4-201ENST00000216513 WDR66Q8TBY9 1149 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 SPATA32Q96LK8 384 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 SERPINC1P01008 464 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 SYCP3Q8IZU3 236 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 CFAP43Q8NDM7 1665 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 SPDYE3A6NKU9 549 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 NAPAP54920 295 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 HOMER2Q9NSB8 354 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 K7ELQ4 463 aaPredicted RBP15.9■□□□□ 0.14
SIX4-201ENST00000216513 CPXCR1Q8N123 301 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 GPCPD1Q9NPB8 672 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 KRT85P78386 507 aa15.9■□□□□ 0.14
SIX4-201ENST00000216513 THRAP3Q9Y2W1 955 aaKnown RBP15.9■□□□□ 0.14
SIX4-201ENST00000216513 BACH1O14867 736 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 ADGRL3Q9HAR2 1447 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 CCDC173Q0VFZ6 552 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
SIX4-201ENST00000216513 NCBP1Q09161 790 aaKnown RBP15.89■□□□□ 0.13
SIX4-201ENST00000216513 MLH3Q9UHC1 1453 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 SYCE3A1L190 88 aa15.89■□□□□ 0.13
SIX4-201ENST00000216513 TIMM10P62072 90 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms