RNA–Protein interactions for RNA: ENST00000216489.7

ALKBH1-201, Transcript of alkB homolog 1, histone H2A dioxygenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALKBH1, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKBH1-201ENST00000216489 PTF1AQ7RTS3 328 aa16.31■□□□□ 0.2
ALKBH1-201ENST00000216489 LIMCH1Q9UPQ0 1083 aa16.31■□□□□ 0.2
ALKBH1-201ENST00000216489 RPAP1Q9BWH6 1393 aaPredicted RBP16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 PDE8AO60658 829 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 DTNBO60941 627 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 CAMTA2O94983 1202 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 HCLS1P14317 486 aaPredicted RBP16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 TTC39AQ5SRH9 613 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 TM6SF1Q9BZW5 370 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 FBXO3Q9UK99 471 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 TCEANC2Q96MN5 208 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 AKAP2Q9Y2D5 859 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 RIPOR2Q9Y4F9 1068 aa16.3■□□□□ 0.2
ALKBH1-201ENST00000216489 CICQ96RK0 1608 aaPredicted RBP16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 SCARF1Q14162 830 aa16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 VPS53Q5VIR6 699 aa16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 COL5A3P25940 1745 aaPredicted RBP16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 ATP2B3Q16720 1220 aa16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 CCDC158Q5M9N0 1113 aa16.29■□□□□ 0.2
ALKBH1-201ENST00000216489 SH3TC1Q8TE82 1336 aa16.28■□□□□ 0.2
ALKBH1-201ENST00000216489 RNF20Q5VTR2 975 aa16.28■□□□□ 0.2
ALKBH1-201ENST00000216489 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
ALKBH1-201ENST00000216489 PI16Q6UXB8 463 aa16.28■□□□□ 0.2
ALKBH1-201ENST00000216489 LINC00116Q8NCU8 138 aa16.28■□□□□ 0.2
ALKBH1-201ENST00000216489 BRD1O95696 1058 aa16.27■□□□□ 0.2
ALKBH1-201ENST00000216489 FAM182BQ5T319 152 aa16.27■□□□□ 0.2
ALKBH1-201ENST00000216489 CCDC83Q8IWF9 413 aa16.27■□□□□ 0.2
ALKBH1-201ENST00000216489 SPEF2Q9C093 1822 aa16.27■□□□□ 0.19
ALKBH1-201ENST00000216489 USPL1Q5W0Q7 1092 aa16.27■□□□□ 0.19
ALKBH1-201ENST00000216489 SMIM5Q71RC9 77 aa16.27■□□□□ 0.19
ALKBH1-201ENST00000216489 UTP14AQ9BVJ6 771 aaKnown RBP16.27■□□□□ 0.19
ALKBH1-201ENST00000216489 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.19
ALKBH1-201ENST00000216489 ZMYM1Q5SVZ6 1142 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 BLOC1S2Q6QNY1 142 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 USP21Q9UK80 565 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 DDX60Q8IY21 1712 aaKnown RBP16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 MAST3O60307 1309 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 PTMSP20962 102 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 PSMA5P28066 241 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 ZAP70P43403 619 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 VGLL2Q8N8G2 317 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
ALKBH1-201ENST00000216489 LRP5O75197 1615 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 M0R2C6 588 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 RNF113AO15541 343 aaKnown RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 ST3GAL1Q11201 340 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 FNBP4Q8N3X1 1017 aaPredicted RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 HELBQ8NG08 1087 aaPredicted RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 U3KPZ7 1027 aaPredicted RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 RPS6KB1P23443 525 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 ME3Q16798 604 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 FOXD4L6Q3SYB3 417 aaPredicted RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 FOXD4L3Q6VB84 417 aaPredicted RBP16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 NECAB1Q8N987 351 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 SEC31BQ9NQW1 1179 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 TPCN1Q9ULQ1 816 aa16.25■□□□□ 0.19
ALKBH1-201ENST00000216489 BCORQ6W2J9 1755 aa16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 CYP21A2P08686 494 aa16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 A0A0G2JLW4 131 aa16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 NTSR2O95665 410 aa16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 DDX49Q9Y6V7 483 aaKnown RBP16.24■□□□□ 0.19
ALKBH1-201ENST00000216489 PARP10Q53GL7 1025 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 SMC3Q9UQE7 1217 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 PRPF40AO75400 957 aaKnown RBP16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 PDE8BO95263 885 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 MCAMP43121 646 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 TSGA10IPQ3SY00 556 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 OSBP2Q969R2 916 aa16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.23■□□□□ 0.19
ALKBH1-201ENST00000216489 BTAF1O14981 1849 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 SNAP23O00161 211 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 TOB2Q14106 344 aaPredicted RBP16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 ZSCAN31Q96LW9 406 aaPredicted RBP16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 AKAP11Q9UKA4 1901 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 WASHC4Q2M389 1173 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 STOX1Q6ZVD7 989 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 SH2B1Q9NRF2 756 aaPredicted RBP16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 BRPF3Q9ULD4 1205 aa16.22■□□□□ 0.19
ALKBH1-201ENST00000216489 THSD7AQ9UPZ6 1657 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 LAMB2P55268 1798 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 GOLGA6L3A6NEY3 463 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 PHKA1P46020 1223 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 AK7Q96M32 723 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 NEK1Q96PY6 1258 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 COL4A1P02462 1669 aa16.21■□□□□ 0.19
ALKBH1-201ENST00000216489 ZNF831Q5JPB2 1677 aa16.21■□□□□ 0.18
ALKBH1-201ENST00000216489 LAMA4Q16363 1823 aa16.21■□□□□ 0.18
ALKBH1-201ENST00000216489 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.18
ALKBH1-201ENST00000216489 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.18
ALKBH1-201ENST00000216489 GJB2P29033 226 aa16.21■□□□□ 0.18
ALKBH1-201ENST00000216489 KRT32Q14532 448 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 197 ms