RNA–Protein interactions for RNA: ENST00000215587.11

POLR2E-201, Transcript of RNA polymerase II subunit E, humanhuman

TSL 3

Gene POLR2E, Length 1,286 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-201ENST00000215587 RIPOR2Q9Y4F9 1068 aa20.39■□□□□ 0.85
POLR2E-201ENST00000215587 MROH5Q6ZUA9 1318 aa20.38■□□□□ 0.85
POLR2E-201ENST00000215587 IFIT2P09913 472 aaKnown RBP20.38■□□□□ 0.85
POLR2E-201ENST00000215587 RPS8P62241 208 aaKnown RBP20.38■□□□□ 0.85
POLR2E-201ENST00000215587 GRAPQ13588 217 aa20.38■□□□□ 0.85
POLR2E-201ENST00000215587 AACSQ86V21 672 aa20.38■□□□□ 0.85
POLR2E-201ENST00000215587 GRAPLQ8TC17 118 aaPredicted RBP20.38■□□□□ 0.85
POLR2E-201ENST00000215587 GPR108Q9NPR9 543 aa20.38■□□□□ 0.85
POLR2E-201ENST00000215587 ANKRD31Q8N7Z5 1873 aa20.37■□□□□ 0.85
POLR2E-201ENST00000215587 NPR1P16066 1061 aa20.37■□□□□ 0.85
POLR2E-201ENST00000215587 HOXA10P31260 410 aaPredicted RBP20.37■□□□□ 0.85
POLR2E-201ENST00000215587 C16orf71Q8IYS4 520 aaPredicted RBP20.37■□□□□ 0.85
POLR2E-201ENST00000215587 KLHL34Q8N239 644 aa20.37■□□□□ 0.85
POLR2E-201ENST00000215587 CELF1Q92879 486 aaKnown RBP20.37■□□□□ 0.85
POLR2E-201ENST00000215587 GPATCH3Q96I76 525 aa20.37■□□□□ 0.85
POLR2E-201ENST00000215587 BSDC1Q9NW68 430 aaPredicted RBP20.37■□□□□ 0.85
POLR2E-201ENST00000215587 AKAP2Q9Y2D5 859 aa20.37■□□□□ 0.85
POLR2E-201ENST00000215587 C10orf71Q711Q0 1435 aa20.36■□□□□ 0.85
POLR2E-201ENST00000215587 TNNI3KQ59H18 835 aa20.36■□□□□ 0.85
POLR2E-201ENST00000215587 PLEKHM2Q8IWE5 1019 aa20.36■□□□□ 0.85
POLR2E-201ENST00000215587 CRAMP1Q96RY5 1269 aa20.36■□□□□ 0.85
POLR2E-201ENST00000215587 FPGT-TNNI3KV9GXZ4 949 aa20.36■□□□□ 0.85
POLR2E-201ENST00000215587 GRIN3BO60391 1043 aa20.35■□□□□ 0.85
POLR2E-201ENST00000215587 MX1P20591 662 aa20.35■□□□□ 0.85
POLR2E-201ENST00000215587 OTUD7AQ8TE49 926 aaPredicted RBP20.35■□□□□ 0.85
POLR2E-201ENST00000215587 ZNF609O15014 1411 aa20.35■□□□□ 0.85
POLR2E-201ENST00000215587 SPEF2Q9C093 1822 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 H0YIN7 160 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 SRGNP10124 158 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 HSPA6P17066 643 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 C2CD5Q86YS7 1000 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 EAF2Q96CJ1 260 aaPredicted RBP20.34■□□□□ 0.85
POLR2E-201ENST00000215587 MASTLQ96GX5 879 aa20.34■□□□□ 0.85
POLR2E-201ENST00000215587 AOX1Q06278 1338 aa20.33■□□□□ 0.85
POLR2E-201ENST00000215587 COL4A1P02462 1669 aa20.33■□□□□ 0.85
POLR2E-201ENST00000215587 PDE1AP54750 535 aa20.33■□□□□ 0.85
POLR2E-201ENST00000215587 ATP2B3Q16720 1220 aa20.33■□□□□ 0.85
POLR2E-201ENST00000215587 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.33■□□□□ 0.85
POLR2E-201ENST00000215587 SALL3Q9BXA9 1300 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 BBOX1O75936 387 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 PDE8BO95263 885 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 ALDH1B1P30837 517 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 CHRNDQ07001 517 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 PUM3Q15397 648 aaKnown RBP20.32■□□□□ 0.84
POLR2E-201ENST00000215587 STYK1Q6J9G0 422 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 TMC4Q7Z404 712 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 VGLL2Q8N8G2 317 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 NLGN2Q8NFZ4 835 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 ANKRD2Q9GZV1 360 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 CCDC8Q9H0W5 538 aaPredicted RBP20.32■□□□□ 0.84
POLR2E-201ENST00000215587 STAP2Q9UGK3 403 aa20.32■□□□□ 0.84
POLR2E-201ENST00000215587 COL11A2P13942 1736 aaPredicted RBP20.31■□□□□ 0.84
POLR2E-201ENST00000215587 A0A1B0GUL7 405 aa20.31■□□□□ 0.84
POLR2E-201ENST00000215587 HELBQ8NG08 1087 aaPredicted RBP20.31■□□□□ 0.84
POLR2E-201ENST00000215587 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
POLR2E-201ENST00000215587 OSBPL3Q9H4L5 887 aa20.31■□□□□ 0.84
POLR2E-201ENST00000215587 MINPP1Q9UNW1 487 aa20.31■□□□□ 0.84
POLR2E-201ENST00000215587 TTC41PQ6P2S7 1318 aa20.3■□□□□ 0.84
POLR2E-201ENST00000215587 ZNF622Q969S3 477 aaKnown RBP eCLIP20.3■□□□□ 0.84
POLR2E-201ENST00000215587 ECHDC1Q9NTX5 307 aa20.3■□□□□ 0.84
POLR2E-201ENST00000215587 TAF1P21675 1872 aa20.29■□□□□ 0.84
POLR2E-201ENST00000215587 PPEF1O14829 653 aaPredicted RBP20.29■□□□□ 0.84
POLR2E-201ENST00000215587 ERC2O15083 957 aa20.29■□□□□ 0.84
POLR2E-201ENST00000215587 SLC5A1P13866 664 aa20.29■□□□□ 0.84
POLR2E-201ENST00000215587 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
POLR2E-201ENST00000215587 TLR7Q9NYK1 1049 aaKnown RBP20.29■□□□□ 0.84
POLR2E-201ENST00000215587 DBNLQ9UJU6 430 aaKnown RBP20.29■□□□□ 0.84
POLR2E-201ENST00000215587 TAF5LO75529 589 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 IFIT1P09914 478 aaKnown RBP20.28■□□□□ 0.84
POLR2E-201ENST00000215587 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.842e-7■■□□□ 14.1
POLR2E-201ENST00000215587 TIMM10P62072 90 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 TTC22Q5TAA0 569 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 LPIN2Q92539 896 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 CNKSR1Q969H4 720 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 DBNDD2Q9BQY9 259 aa20.28■□□□□ 0.84
POLR2E-201ENST00000215587 GPBP1L1Q9HC44 474 aaPredicted RBP20.28■□□□□ 0.84
POLR2E-201ENST00000215587 GLRX3O76003 335 aaKnown RBP20.27■□□□□ 0.84
POLR2E-201ENST00000215587 CHRNA5P30532 468 aa20.27■□□□□ 0.84
POLR2E-201ENST00000215587 KCNJ4P48050 445 aa20.27■□□□□ 0.84
POLR2E-201ENST00000215587 TSHZ3Q63HK5 1081 aa20.27■□□□□ 0.84
POLR2E-201ENST00000215587 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
POLR2E-201ENST00000215587 FGFR2P21802 821 aa20.26■□□□□ 0.83
POLR2E-201ENST00000215587 UBE4AQ14139 1066 aa20.26■□□□□ 0.83
POLR2E-201ENST00000215587 BMP2KLQ5H9B9 411 aa20.26■□□□□ 0.83
POLR2E-201ENST00000215587 ANKIB1Q9P2G1 1089 aa20.26■□□□□ 0.83
POLR2E-201ENST00000215587 XDHP47989 1333 aa20.26■□□□□ 0.83
POLR2E-201ENST00000215587 KIF13BQ9NQT8 1826 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 TGFB2P61812 414 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 CCDC158Q5M9N0 1113 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 SP8Q8IXZ3 490 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 XAGE2Q96GT9 111 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 ATP6V0A2Q9Y487 856 aa20.25■□□□□ 0.83
POLR2E-201ENST00000215587 A0A1B0GUL6 1792 aa20.24■□□□□ 0.83
POLR2E-201ENST00000215587 ADORA1P30542 326 aa20.24■□□□□ 0.83
POLR2E-201ENST00000215587 PRPF40BQ6NWY9 871 aaKnown RBP20.24■□□□□ 0.83
POLR2E-201ENST00000215587 PI4K2BQ8TCG2 481 aa20.24■□□□□ 0.83
POLR2E-201ENST00000215587 LRRC37AA6NMS7 1700 aa20.23■□□□□ 0.83
POLR2E-201ENST00000215587 GSPT1P15170 499 aaKnown RBP20.23■□□□□ 0.83
POLR2E-201ENST00000215587 ATP5JP18859 108 aa20.23■□□□□ 0.83
POLR2E-201ENST00000215587 TTC39AQ5SRH9 613 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms