RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
USH1C-201ENST00000005226 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
USH1C-201ENST00000005226 ANKARQ7Z5J8 1434 aa16.52■□□□□ 0.24
USH1C-201ENST00000005226 ADD1P35611 737 aaKnown RBP16.52■□□□□ 0.24
USH1C-201ENST00000005226 UBE3BQ7Z3V4 1068 aa16.52■□□□□ 0.24
USH1C-201ENST00000005226 FILIP1Q7Z7B0 1213 aa16.52■□□□□ 0.24
USH1C-201ENST00000005226 ALDH8A1Q9H2A2 487 aaPredicted RBP16.52■□□□□ 0.24
USH1C-201ENST00000005226 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
USH1C-201ENST00000005226 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.52■□□□□ 0.24
USH1C-201ENST00000005226 V9GYY5 206 aaPredicted RBP16.52■□□□□ 0.24
USH1C-201ENST00000005226 ZNF609O15014 1411 aa16.52■□□□□ 0.24
USH1C-201ENST00000005226 IQCB1Q15051 598 aa16.52■□□□□ 0.23
USH1C-201ENST00000005226 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.23
USH1C-201ENST00000005226 USPL1Q5W0Q7 1092 aa16.52■□□□□ 0.23
USH1C-201ENST00000005226 ORAI2Q96SN7 254 aa16.52■□□□□ 0.23
USH1C-201ENST00000005226 TRMT1Q9NXH9 659 aaKnown RBP16.52■□□□□ 0.23
USH1C-201ENST00000005226 HEG1Q9ULI3 1381 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 GOLGA6L19H0YKK7 550 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 CTDNEP1O95476 244 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 PTPN12Q05209 780 aaKnown RBP16.51■□□□□ 0.23
USH1C-201ENST00000005226 NEXNQ0ZGT2 675 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 NFATC2IPQ8NCF5 419 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 ATP5JP18859 108 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 USP28Q96RU2 1077 aa16.51■□□□□ 0.23
USH1C-201ENST00000005226 KCNH5Q8NCM2 988 aa16.5■□□□□ 0.23
USH1C-201ENST00000005226 RFX5P48382 616 aaPredicted RBP16.49■□□□□ 0.23
USH1C-201ENST00000005226 ZNF790Q6PG37 636 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 ARHGEF25Q86VW2 580 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 LRRC8AQ8IWT6 810 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 NSUN7Q8NE18 718 aaKnown RBP16.49■□□□□ 0.23
USH1C-201ENST00000005226 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
USH1C-201ENST00000005226 NEUROD6Q96NK8 337 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 NFAT5O94916 1531 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 SMTNL1A8MU46 457 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 KRT32Q14532 448 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 MCMDC2Q4G0Z9 681 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 OTUD7BQ6GQQ9 843 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 CCDC112Q8NEF3 446 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 CFAP45Q9UL16 551 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 TAOK2Q9UL54 1235 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 ARHGAP23Q9P227 1491 aa16.49■□□□□ 0.23
USH1C-201ENST00000005226 PTPDC1A2A3K4 754 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 KLHL34Q8N239 644 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 ZNF496Q96IT1 587 aaPredicted RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 METTL22Q9BUU2 404 aaPredicted RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 GPHNQ9NQX3 736 aaPredicted RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 GOLIM4O00461 696 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 TIMM10P62072 90 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 SNW1Q13573 536 aaKnown RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 CEP135Q66GS9 1140 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 ANKRD13DQ6ZTN6 518 aa16.48■□□□□ 0.23
USH1C-201ENST00000005226 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
USH1C-201ENST00000005226 BECN2A8MW95 431 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 JCADQ9P266 1359 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 SKILP12757 684 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 ME1P48163 572 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 RAB11FIP4Q86YS3 637 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
USH1C-201ENST00000005226 COPRSQ9NQ92 184 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 SLIT1O75093 1534 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 NPHP1O15259 732 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 SMARCC2Q8TAQ2 1214 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 RCOR1Q9UKL0 485 aa16.47■□□□□ 0.23
USH1C-201ENST00000005226 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
USH1C-201ENST00000005226 A0A087WZG4 1122 aa16.46■□□□□ 0.23
USH1C-201ENST00000005226 CCDC69A6NI79 296 aa16.46■□□□□ 0.23
USH1C-201ENST00000005226 PFKFB2O60825 505 aa16.46■□□□□ 0.23
USH1C-201ENST00000005226 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
USH1C-201ENST00000005226 TTLL5Q6EMB2 1281 aa16.46■□□□□ 0.23
USH1C-201ENST00000005226 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
USH1C-201ENST00000005226 AOPEPQ8N6M6 819 aa16.46■□□□□ 0.23
USH1C-201ENST00000005226 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.22
USH1C-201ENST00000005226 ADGRL3Q9HAR2 1447 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 A0A1B0GVL5 298 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 STX1AQ16623 288 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 LMBR1LQ6UX01 489 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 CCDC73Q6ZRK6 1079 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 DHX32Q7L7V1 743 aaKnown RBP16.45■□□□□ 0.22
USH1C-201ENST00000005226 HAUS7Q99871 368 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 GJB4Q9NTQ9 266 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 CTNNA3Q9UI47 895 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 LMO7Q8WWI1 1683 aa16.45■□□□□ 0.22
USH1C-201ENST00000005226 KINO60870 393 aaKnown RBP16.44■□□□□ 0.22
USH1C-201ENST00000005226 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
USH1C-201ENST00000005226 ZNF215Q9UL58 517 aaPredicted RBP16.44■□□□□ 0.22
USH1C-201ENST00000005226 ENGASEQ8NFI3 743 aa16.44■□□□□ 0.22
USH1C-201ENST00000005226 FMNL2Q96PY5 1086 aa16.44■□□□□ 0.22
USH1C-201ENST00000005226 BIN1O00499 593 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 PAXBP1Q9Y5B6 917 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
USH1C-201ENST00000005226 CCZ1BP86790 482 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 CCZ1P86791 482 aaPredicted RBP16.43■□□□□ 0.22
USH1C-201ENST00000005226 PTPN14Q15678 1187 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 ISM2Q6H9L7 571 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 KBTBD3Q8NAB2 608 aa16.43■□□□□ 0.22
USH1C-201ENST00000005226 ZNF594Q96JF6 807 aaPredicted RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms