RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 ERCC6L2Q5T890 1561 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 FAM135BQ49AJ0 1406 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 B4DLN1 442 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 ALDH1B1P30837 517 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 MRPL12P52815 198 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 EIF6P56537 245 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 TTC6Q86TZ1 520 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 PCDHB15Q9Y5E8 787 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 KLF18A0A0U1RQI7 1052 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 MAP3K11Q16584 847 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 NBPF7P0C2Y1 421 aaPredicted RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 CDR1P51861 262 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 NOM1Q5C9Z4 860 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 RUFY1Q96T51 708 aa11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
NIPAL3-201ENST00000003912 KIAA0232Q92628 1395 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 ZNF335Q9H4Z2 1342 aaPredicted RBP11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 PDE6BP35913 854 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 GRM1Q13255 1194 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 RBM8AQ9Y5S9 174 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 ARAP3Q8WWN8 1544 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 CALM1P0DP23 149 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 CALM2P0DP24 149 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 CALM3P0DP25 149 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 AMPD3Q01432 767 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 ROBO2Q9HCK4 1378 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 FGFR1OPO95684 399 aaKnown RBP11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 POTEJP0CG39 1038 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 RTN1Q16799 776 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 G2E3Q7L622 706 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 LARGE2Q8N3Y3 721 aa11.98□□□□□ -0.49
NIPAL3-201ENST00000003912 BRF1Q92994 677 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 ARGLU1Q9NWB6 273 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 RBM27Q9P2N5 1060 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 KDM5AP29375 1690 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 MIGA1Q8NAN2 632 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 SAMM50Q9Y512 469 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 GJB2P29033 226 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 EIF5P55010 431 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 NMIQ13287 307 aaPredicted RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 CERS3Q8IU89 383 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 UBA5Q9GZZ9 404 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 ACBD3Q9H3P7 528 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 SH2D4AQ9H788 454 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 RTL1A6NKG5 1358 aa11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 SEPT11Q9NVA2 429 aaKnown RBP11.97□□□□□ -0.49
NIPAL3-201ENST00000003912 ATP7BP35670 1465 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 RTL9Q8NET4 1388 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 ANAPC15P60006 121 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 STXBP4Q6ZWJ1 553 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 ARHGEF25Q86VW2 580 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 WDR66Q8TBY9 1149 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 ZBTB40Q9NUA8 1239 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 ABCC3O15438 1527 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 TRIM35Q9UPQ4 493 aa11.96□□□□□ -0.49
NIPAL3-201ENST00000003912 A0A1B0GUL7 405 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 ERMNQ8TAM6 284 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 HOOK2Q96ED9 719 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 SHROOM2Q13796 1616 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 UBA7P41226 1012 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 USP19O94966 1318 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 RAD50Q92878 1312 aa11.96□□□□□ -0.5
NIPAL3-201ENST00000003912 AATKQ6ZMQ8 1374 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 BMP15O95972 392 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 TEX11Q8IYF3 940 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 MCM4P33991 863 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 RAB11FIP4Q86YS3 637 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 ERBB4Q15303 1308 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 CTAGE5O15320 804 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 TCIRG1Q13488 830 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 GCKRQ14397 625 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 ZNF397Q8NF99 534 aaPredicted RBP11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 LARP6Q9BRS8 491 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 ANO10Q9NW15 660 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 MROH5Q6ZUA9 1318 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 RBM25P49756 843 aaKnown RBP11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 CCDC150Q8NCX0 1101 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 CNNM3Q8NE01 707 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 JAG2Q9Y219 1238 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 ARHGAP31Q2M1Z3 1444 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 SPATA31E1Q6ZUB1 1445 aa11.95□□□□□ -0.5
NIPAL3-201ENST00000003912 FKBP15Q5T1M5 1219 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 STX6O43752 255 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 HEATR3Q7Z4Q2 680 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 SKAP1Q86WV1 359 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 NIM1KQ8IY84 436 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 SPC24Q8NBT2 197 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 LPIN2Q92539 896 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 WDR17Q8IZU2 1322 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 PRC1O43663 620 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 TNNI3KQ59H18 835 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 HELLSQ9NRZ9 838 aa11.94□□□□□ -0.5
NIPAL3-201ENST00000003912 FPGT-TNNI3KV9GXZ4 949 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms