RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 GabrdP22933 449 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Mdm2P23804 489 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Nlrp9aQ66X03 949 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ufl1Q8CCJ3 793 aaKnown RBP9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 CpzQ8R4V4 654 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Popdc2Q9ES82 367 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Adarb2Q9JI20 745 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Pmfbp1Q9WVQ0 1022 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ccne2Q9Z238 404 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Myo3bQ1EG27 1305 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Col22a1E9Q7P1 1613 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Slc39a11Q8BWY7 342 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Tshz3Q8CGV9 1081 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Erc1Q99MI1 1120 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Plekhf1Q3TB82 279 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ppp4r3bQ922R5 820 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 ParvgQ9ERD8 331 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Adamtsl1Q8BLI0 1745 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 Setdb1O88974 1307 aa9.02□□□□□ -0.97
Usp40-204ENSMUST00000187758 1810065E05RikQ5NC41 235 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Znf496Q5SXI5 585 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Strip1Q8C079 837 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 McamQ8R2Y2 648 aaKnown RBP9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Fam84aQ9D650 292 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rad50P70388 1312 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Kif23E9Q5G3 953 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Sptlc3Q8BG54 563 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Mlh1Q9JK91 760 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Npc1l1Q6T3U4 1333 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Oas2E9Q9A9 742 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Slurp2P0DP59 97 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Prl3d1P18121 224 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Casp1P29452 402 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Col11a2Q64739 1736 aa9.01□□□□□ -0.97
Usp40-204ENSMUST00000187758 Cyp3a57D3YYZ0 503 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Abtb2Q7TQI7 1024 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Mrps27Q8BK72 415 aaKnown RBP9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Il15P48346 162 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Anapc15P60007 132 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Slc14a2Q8R4T9 930 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ccdc6D3YZP9 469 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Stk11ipQ3TAA7 1072 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Nek11Q8C0Q4 628 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rbm17Q8JZX4 405 aaKnown RBP9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Lrp5Q91VN0 1614 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ube3bQ9ES34 1070 aa9□□□□□ -0.97
Usp40-204ENSMUST00000187758 Zkscan16A2ALW2 728 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Prl7d1P04769 244 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 NpeppsQ11011 920 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ifit2Q64112 472 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Atxn2lQ7TQH0 1049 aaKnown RBP8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Osbpl5Q9ER64 874 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Lgr5Q9Z1P4 907 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rnf123Q5XPI3 1314 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Izumo3A6PWV3 263 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rnf20Q5DTM8 973 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rassf8Q8CJ96 419 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Map3k15A2AQW0 1331 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rbm8a2A0A0N4SUH6 174 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Phactr2B1AVP0 632 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ell2Q3UKU1 639 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 ZyxQ62523 564 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 AnlnQ8K298 1121 aaKnown RBP8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rbm8aQ9CWZ3 174 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Sytl4Q9R0Q1 673 aa8.99□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ccdc85cE9Q6B2 420 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Aknad1E9Q8N6 675 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Celf1P28659 486 aaKnown RBP8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Slc7a3P70423 618 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Bmp2kQ91Z96 1138 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Irs4Q9Z0Y7 1216 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Kif13bA0A286YCV9 1847 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Cfap44E9Q5M6 1843 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ak2Q9WTP6 239 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Pram1Q6BCL1 675 aa8.98□□□□□ -0.97
Usp40-204ENSMUST00000187758 Col3a1P08121 1464 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Hap1O35668 628 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Atp6v0a2P15920 856 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 AidaQ8C4Q6 305 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 LlphQ9D945 130 aaKnown RBP8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Smarce1O54941 411 aaKnown RBP8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Rfx1P48377 963 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 HlfQ8BW74 295 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Pus3Q9JI38 481 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 IncenpQ9WU62 880 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Znf609Q8BZ47 1413 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Psd3Q2PFD7 1037 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Washc4Q3UMB9 1173 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Pla2g4fQ50L41 855 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 EngaseQ8BX80 734 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ms4a2P20490 235 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Lmbrd2Q8C561 694 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 UvssaQ9D479 717 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Appbp2Q9DAX9 585 aa8.97□□□□□ -0.97
Usp40-204ENSMUST00000187758 Mre11Q61216 706 aa8.96□□□□□ -0.97
Usp40-204ENSMUST00000187758 Nme8Q715T0 586 aa8.96□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ints3Q7TPD0 1041 aaKnown RBP8.96□□□□□ -0.97
Usp40-204ENSMUST00000187758 KinQ8K339 391 aa8.96□□□□□ -0.97
Usp40-204ENSMUST00000187758 Col23a1Q8K4G2 532 aa8.96□□□□□ -0.97
Usp40-204ENSMUST00000187758 Ezh2Q61188 746 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 22,080 RNA–protein pairs in 70.5 ms