RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 MyclP10166 368 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ms4a1P19437 291 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Rrp1P56183 494 aaKnown RBP14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Cct2P80314 535 aaKnown RBP14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Morc2aQ69ZX6 1030 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 ThemisQ8BGW0 636 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 AppP12023 770 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Atp1a3Q6PIC6 1013 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Nxf7Q80SZ6 620 aaKnown RBP14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Chmp7Q8R1T1 451 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Zkscan4Q5SZT6 480 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Cep135Q6P5D4 1140 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Dhx40Q6PE54 779 aaKnown RBP14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Zfp397Q7TNK4 527 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Erc1Q99MI1 1120 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 TefQ9JLC6 301 aa14.32□□□□□ -0.12
Lig1-210ENSMUST00000165964 Gm21985Q6P6P5 1106 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Slu7Q8BHJ9 585 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Trim59Q922Y2 403 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Phkg2Q9DB30 406 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 PigbQ9JJQ0 542 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Rgs9O54828 675 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Cyp2d10P24456 504 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Exosc10P56960 887 aaKnown RBP14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Dnajc14Q921R4 703 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Col4a3bpQ9EQG9 624 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 TnrQ8BYI9 1358 aa14.31□□□□□ -0.12
Lig1-210ENSMUST00000165964 Atp2b1G5E829 1220 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Frmd3Q8BHD4 595 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 GphnQ8BUV3 769 aaKnown RBP14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Golph3lQ8R088 285 aaKnown RBP14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 BrapQ99MP8 591 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Sipa1l2Q80TE4 1722 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Mtx1P47802 317 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ccdc129Q14B48 1034 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Soga3Q6NZL0 945 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Q8BZJ8 459 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Dnaaf4Q8R368 420 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 TkfcQ8VC30 578 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Frat1P70339 274 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Gnat3Q3V3I2 354 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Taf3Q5HZG4 932 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Gpatch3Q8BIY1 525 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Otud6bQ8K2H2 294 aa14.3□□□□□ -0.12
Lig1-210ENSMUST00000165964 Nlrp1aQ2LKU9 1182 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Golim4Q8BXA1 655 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ints4Q8CIM8 964 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Pms1Q8K119 917 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Hnrnpul1Q8VDM6 859 aaKnown RBP14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Gli3Q61602 1583 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ccdc82Q6PG04 518 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Fsd1Q7TPM6 496 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Lmbrd2Q8C561 694 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 Shank2Q80Z38 1476 aa14.29□□□□□ -0.12
Lig1-210ENSMUST00000165964 XpcP51612 930 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Dzip1Q8BMD2 852 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Rufy2Q8R4C2 606 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Pde3aQ9Z0X4 1141 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ddx60E9PZQ1 1711 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ric1Q69ZJ7 1422 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Cyp2d34L7N463 504 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Surf1P09925 306 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Timm10P62073 90 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 NfkbibQ60778 359 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ppp4r3aQ6P2K6 820 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 OptnQ8K3K8 584 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Ccer1Q9CQL2 403 aa14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Pes1Q9EQ61 584 aaKnown RBP14.28□□□□□ -0.12
Lig1-210ENSMUST00000165964 Sult6b1P0CC03 303 aa14.27□□□□□ -0.12
Lig1-210ENSMUST00000165964 Anks1aP59672 1150 aa14.27□□□□□ -0.12
Lig1-210ENSMUST00000165964 Hspd1P63038 573 aaKnown RBP14.27□□□□□ -0.12
Lig1-210ENSMUST00000165964 CenpqQ9CPQ5 267 aa14.27□□□□□ -0.12
Lig1-210ENSMUST00000165964 ZyxQ62523 564 aa14.27□□□□□ -0.13
Lig1-210ENSMUST00000165964 Fkbp5Q64378 456 aa14.27□□□□□ -0.13
Lig1-210ENSMUST00000165964 Ddx58Q6Q899 926 aa14.27□□□□□ -0.13
Lig1-210ENSMUST00000165964 Creld2Q9CYA0 350 aa14.27□□□□□ -0.13
Lig1-210ENSMUST00000165964 Prl3d3A0A0M6L0J6 224 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Atad2Q8CDM1 1040 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Ddx41Q91VN6 622 aaKnown RBP14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Atg9aQ68FE2 551 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Rrs1Q9CYH6 365 aaKnown RBP14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Ankle2Q6P1H6 964 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Tmc2Q8R4P4 888 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Naa16Q9DBB4 864 aa14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 Usp42B2RQC2 1324 aaKnown RBP14.26□□□□□ -0.13
Lig1-210ENSMUST00000165964 LyarQ08288 388 aaKnown RBP14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Tcof1O08784 1320 aaKnown RBP14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Sos2Q02384 1333 aa14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Tns3Q5SSZ5 1440 aa14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Ercc3P49135 783 aa14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 MlecQ6ZQI3 291 aaKnown RBP14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Rbm17Q8JZX4 405 aaKnown RBP14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Vps33aQ9D2N9 598 aa14.25□□□□□ -0.13
Lig1-210ENSMUST00000165964 Asic4Q7TNS7 539 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 Ncaph2Q8BSP2 607 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 CrklP47941 303 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 Alg3Q8K2A8 438 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 Pramel3A2AHA7 463 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 Gm7903A2AWL1 463 aa14.24□□□□□ -0.13
Lig1-210ENSMUST00000165964 AV320801A2AWL3 467 aa14.24□□□□□ -0.13
Retrieved 100 of 22,080 RNA–protein pairs in 13.3 ms