RNA–Protein interactions for RNA: ENSMUST00000160721.7

Pcdh1-203, Transcript of Protocadherin 1 (Fragment), mousemouse

TSL 5 BASIC

Gene Pcdh1, Length 5,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-203ENSMUST00000160721 Fndc1E9Q043 1732 aa18.33■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Vamp4O70480 141 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Tmem266Q8BZB3 538 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ufl1Q8CCJ3 793 aaKnown RBP18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atf7Q8R0S1 413 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Chd1lQ9CXF7 900 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Sil1Q9EPK6 465 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Adam1aQ60813 791 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Pram1Q6BCL1 675 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Cdan1Q8CC12 1239 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Myl6bQ8CI43 207 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Naa16Q9DBB4 864 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Zcwpw1Q6IR42 630 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atp6v1aP50516 617 aaKnown RBP18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 IqcgQ80W32 419 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Fam160b2Q80YR2 744 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Iffo1Q8BXL9 562 aa18.32■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Duxf3A0A0N4SV92 674 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ddx10Q80Y44 875 aaKnown RBP18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Mtmr3Q8K296 1196 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Smco2Q9DA21 347 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Rbbp8nlA2ABX0 614 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Hdhd2Q3UGR5 259 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Zfyve16Q80U44 1528 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 NmiO35309 314 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ppfibp2O35711 882 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Cul5Q9D5V5 780 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 LlphQ9D945 130 aaKnown RBP18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ktn1Q61595 1327 aaKnown RBP18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ripply1Q2WG77 201 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Cacna2d4Q5RJF7 1116 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Znf219Q6IQX8 726 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Rab3gap1Q80UJ7 981 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 FanclQ9CR14 375 aa18.31■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Stat1P42225 749 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ankrd40Q5SUE8 363 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Tbc1d8Q9Z1A9 1134 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Catsper2A2ARP9 588 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Sh3d21Q7TSG5 549 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Vps16Q920Q4 839 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 MthfsQ9D110 203 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Armc3A2AU72 881 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ppfia1B2RXQ2 1266 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Dapk3O54784 448 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Rbm17Q8JZX4 405 aaKnown RBP18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Cfap53Q9D439 514 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Syt10Q9R0N4 523 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Clcn1Q64347 994 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Nop53Q8BK35 484 aaKnown RBP18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Uggt2E9Q4X2 1504 aa18.3■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ampd3O08739 766 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Ano10Q8BH79 659 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Irs4Q9Z0Y7 1216 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Tceanc2Q8R2M0 207 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Nkx1-2P42580 305 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Kif1bQ60575 1816 aaKnown RBP18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Srgap1Q91Z69 1062 aa18.29■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 AlkP97793 1621 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atp2b1G5E829 1220 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Api5O35841 504 aaKnown RBP18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Snrpa1P57784 255 aaKnown RBP18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Trim27Q62158 513 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Slc4a4O88343 1079 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atp8b2P98199 1209 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atf7ipQ7TT18 1306 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Akap2O54931 893 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Usp5P56399 858 aaKnown RBP18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Gtpbp6Q3U6U5 514 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Fchsd1Q6PFY1 688 aa18.28■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Hmg20bQ9Z104 317 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Stox1B2RQL2 990 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Atp2b4Q6Q477 1205 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Hook3Q8BUK6 718 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 ParnQ8VDG3 624 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Nphp3Q7TNH6 1325 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Metap2O08663 478 aaKnown RBP18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Itga6Q61739 1091 aa18.27■□□□□ 0.52
Pcdh1-203ENSMUST00000160721 Tbc1d2bQ3U0J8 965 aa18.27■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 LratQ9JI60 231 aa18.27■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Slc1a4O35874 532 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Nyap1Q6PFX7 833 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ppfibp1Q8C8U0 969 aaKnown RBP18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Dph6Q9CQ28 267 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 DonsonQ9QXP4 560 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 GmnnO88513 206 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Large2Q5XPT3 690 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ppp4r3aQ6P2K6 820 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Spata24Q6P926 205 aa18.26■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Fez2Q6TYB5 348 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Ankrd23Q812A3 306 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Brd3Q8K2F0 726 aaKnown RBP18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 FancaQ9JL70 1439 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Gas2l2Q5SSG4 860 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Calml4Q91WQ9 153 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Fam76aQ922G2 307 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Xrcc4Q924T3 326 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Epb41l3Q9WV92 929 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Cfap157Q0VFX2 523 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Pim2Q62070 370 aa18.25■□□□□ 0.51
Pcdh1-203ENSMUST00000160721 Rad17Q6NXW6 688 aa18.25■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 130 ms