RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Samsn1P57725 372 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Map3k11Q80XI6 850 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Znf428Q8C1M2 176 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Atp1a4Q9WV27 1032 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Gm9992B2RWK3 458 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Pex1Q5BL07 1284 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Unc93aQ710D3 458 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Rbm17Q8JZX4 405 aaKnown RBP13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Cdca7lQ922M5 438 aa13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Gtpbp4Q99ME9 634 aaKnown RBP13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Ctnnbl1Q9CWL8 563 aaKnown RBP13.35□□□□□ -0.27
Ndc1-204ENSMUST00000139560 ScaperF8VQ70 1398 aaKnown RBP13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 DroshaQ5HZJ0 1373 aaKnown RBP13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Gucy1b3O54865 620 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Tom1O88746 492 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Prdm1Q60636 856 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Ripk4Q9ERK0 786 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Pla2r1Q62028 1487 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 RarsQ9D0I9 660 aaKnown RBP13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Shroom2A2ALU4 1481 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Grm8P47743 908 aa13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Ppp1r10Q80W00 888 aaKnown RBP13.34□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Adgrb2Q8CGM1 1561 aa13.33□□□□□ -0.27
Ndc1-204ENSMUST00000139560 Kmt5bQ3U8K7 883 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Brd3Q8K2F0 726 aaKnown RBP13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Bicc1Q99MQ1 977 aaKnown RBP13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Hoxb7P09024 217 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Myo1bP46735 1107 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Triml1Q8BVP1 470 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Krt25Q8VCW2 446 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Nphp3Q7TNH6 1325 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ets1P27577 440 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rad23bP54728 416 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Igf2bp2Q5SF07 592 aaKnown RBP13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Kcnn1Q9EQR3 537 aa13.33□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Kif2aP28740 705 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Evi5P97366 809 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rassf4Q8CB96 322 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 ClasrpQ8CFC7 668 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Erlin1Q91X78 346 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Hmg20bQ9Z104 317 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 WizO88286 1684 aaKnown RBP13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Wdr93Q402B2 695 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Znf697Q569E7 569 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 LarsQ8BMJ2 1178 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Tmx4Q8C0L0 335 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Lonrf3Q9D4H7 753 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Plekho1Q9JIY0 408 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Plagl1Q9JLQ4 704 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Zkscan5Q9Z1D8 819 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Speer4dL7N216 212 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Mmp8O70138 465 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Zc3h12cQ5DTV4 884 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ankrd13dQ6PD24 605 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Camsap2Q8C1B1 1461 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ift88Q61371 824 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 TrhQ62361 256 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Wdr24Q8CFJ9 790 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Terf2ipQ91VL8 393 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Desi2Q9D291 194 aa13.32□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rbm26Q6NZN0 1012 aaKnown RBP13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Wdr70Q3TWF6 657 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 SdsQ8VBT2 327 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Zbtb43Q9DAI4 467 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Spocd1B1ASB6 936 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ccdc162pQ0VG85 912 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Nlrp2Q4PLS0 1046 aaKnown RBP13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Zscan22Q8BGS5 496 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Antxr1Q9CZ52 562 aa13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Prpf40aQ9R1C7 953 aaKnown RBP13.31□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Top1Q04750 767 aaKnown RBP13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Atp2b3Q0VF55 1220 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Trak2Q6P9N8 913 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Prkab2Q6PAM0 271 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Znf18Q810A1 556 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Tmem143Q8VD26 458 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 PaskQ8CEE6 1383 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Kifc2O08672 792 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Xpo4Q9ESJ0 1151 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Krt23Q99PS0 422 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Terf1P70371 421 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Pram1Q6BCL1 675 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Me3Q8BMF3 604 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Taf7Q9R1C0 341 aa13.3□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Snd1Q78PY7 910 aaKnown RBP13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rab3gap1Q80UJ7 981 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Cdca8Q8BHX3 289 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Tsnaxip1Q99P25 704 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Stx17Q9D0I4 301 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rad17Q6NXW6 688 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Luc7l2Q7TNC4 392 aaKnown RBP13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Dhx38Q80X98 1228 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Rnf41Q8BH75 317 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Fam135bQ9DAI6 1403 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ccdc172Q810N9 267 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Ranbp6Q8BIV3 1105 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Jade3Q6IE82 823 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 4921504E06RikQ8CET2 560 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Brms1Q99N20 246 aa13.29□□□□□ -0.28
Ndc1-204ENSMUST00000139560 Izumo3A6PWV3 263 aa13.28□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 10.8 ms