RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 CrbnQ8C7D2 445 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Trappc12Q8K2L8 797 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Kcnc4Q8R1C0 628 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Slc14a2Q8R4T9 930 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Lmbr1lQ9D1E5 489 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Zcchc17Q9ESX4 241 aaKnown RBP11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Terf1P70371 421 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Slain1Q68FF7 579 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Ndfip2Q91ZP6 311 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Sytl4Q9R0Q1 673 aa11.76□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Wdr66E9Q743 1299 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Usp17lbE9Q9U0 468 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Kifc2O08672 792 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Itgb7P26011 806 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Snrpa1P57784 255 aaKnown RBP11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Large2Q5XPT3 690 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Mphosph10Q810V0 681 aaKnown RBP11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 SisF8VQM5 1818 aa11.75□□□□□ -0.53
Ssr3-202ENSMUST00000119896 NrapQ80XB4 1728 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Mageb2A2AHM0 380 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Vamp4O70480 141 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Csrnp1P59054 583 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Chl1P70232 1209 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Znf496Q5SXI5 585 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Tll1Q62381 1013 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Ddx31Q6NZQ2 687 aaKnown RBP11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Pbx4Q99NE9 378 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Glrx3Q9CQM9 337 aa11.74□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Irf6P97431 467 aa11.73□□□□□ -0.53
Ssr3-202ENSMUST00000119896 WdpcpQ8C456 722 aa11.73□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Snap47Q8R570 413 aa11.73□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Lman1lQ8VCD3 505 aa11.73□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Speer4f1Q9D5Q6 258 aa11.73□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Gm6268A2A3U9 297 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Pde4aO89084 844 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Map3k13Q1HKZ5 959 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Ttll12Q3UDE2 639 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Akap4Q60662 849 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 HellsQ60848 821 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Ddx20Q9JJY4 825 aaKnown RBP11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 EvplQ9D952 2035 aa11.72□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Skint7A7XV04 395 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 NudcO35685 332 aaKnown RBP11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Wnt10bP48614 389 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Mmp14P53690 582 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Traf5P70191 558 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Slc10a4Q3UEZ8 437 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Ccdc51Q3URS9 406 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Nol10Q5RJG1 687 aaKnown RBP11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 LdhdQ7TNG8 484 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Znf18Q810A1 556 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Rnf181Q9CY62 165 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 EhhadhQ9DBM2 718 aa11.71□□□□□ -0.53
Ssr3-202ENSMUST00000119896 Peak1Q69Z38 1735 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Usp17ldG5E8G2 545 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Usp17lcG5E8I7 545 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Zap70P43404 618 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Rangap1P46061 589 aaKnown RBP11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Slc38a10Q5I012 1090 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Adam39Q7M762 756 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Kbtbd13Q8C828 458 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 KarsQ99MN1 595 aaKnown RBP11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Lysmd1Q9D0E3 226 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Arih1Q9Z1K5 555 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Ksr2Q3UVC0 959 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Mrs2Q5NCE8 434 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Nell2Q61220 819 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Bend3Q6PAL0 825 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 NexnQ7TPW1 607 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Mxd3Q80US8 206 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Epc2Q8C0I4 808 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Tmem143Q8VD26 458 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Gimap3Q99MI6 301 aa11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Gtf2iQ9ESZ8 998 aaKnown RBP11.7□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Psme4Q5SSW2 1843 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 EspnlQ3UYR4 1005 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Znf697Q569E7 569 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Bms1Q6PGF5 1284 aaKnown RBP11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Slc4a7Q8BTY2 1034 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Hdac9Q99N13 588 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Trim26Q99PN3 545 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Mrpl12Q9DB15 201 aaKnown RBP11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Phrf1A6H619 1682 aa11.69□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Bin2D3Z6Q9 489 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Cfdp1O88271 295 aaKnown RBP11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Anxa1P10107 346 aaKnown RBP11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Aifm3Q3TY86 605 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Gas2l2Q5SSG4 860 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Ralbp1Q62172 648 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Secisbp2lQ6A098 1086 aaKnown RBP11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Fchsd1Q6PFY1 688 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Rassf10Q8BL43 508 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Rbm33Q9CXK9 1231 aaKnown RBP11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Tmem79Q9D709 391 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Tgm5Q9D7I9 724 aa11.68□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Polr2aP08775 1970 aaKnown RBP11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Col3a1P08121 1464 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Casp1P29452 402 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Gnat3Q3V3I2 354 aa11.67□□□□□ -0.54
Ssr3-202ENSMUST00000119896 Rtp1Q8C8C1 263 aa11.67□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 89.3 ms