RNA–Protein interactions for RNA: ENSMUST00000116359.2

Ctc1-202, Transcript of CST complex subunit CTC1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ctc1, Length 3,978 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctc1-202ENSMUST00000116359 Mdh1P14152 334 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Hnrnph2P70333 449 aaKnown RBP11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Gtf2f1Q3THK3 508 aaKnown RBP11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Dip2bQ3UH60 1574 aa11.79□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Cdk5rap2Q8K389 1822 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 C2cd2E9Q3C1 696 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Eef2kO08796 724 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Scp2P32020 547 aaKnown RBP11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 HrQ61645 1182 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Bloc1s2Q9CWG9 143 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Dusp10Q9ESS0 483 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Add2Q9QYB8 725 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tmed8Q3UHI4 326 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Cdc37Q61081 379 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Erlin2Q8BFZ9 340 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Kiaa1524Q8BWY9 907 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Tceanc2Q8R2M0 207 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Znf541Q0GGX2 1363 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Rgs22G3UYX5 1258 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Gng11P61953 73 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Xrn1P97789 1719 aaKnown RBP11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Me3Q8BMF3 604 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Phf23Q8BSN5 401 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ccdc186Q8C9S4 917 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Srgap1Q91Z69 1062 aa11.78□□□□□ -0.52
Ctc1-202ENSMUST00000116359 EmbP21995 330 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 ErmnQ5EBJ4 281 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 TxlnaQ6PAM1 554 aaKnown RBP11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Baiap3Q80TT2 1134 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Nap1l2P51860 460 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ppp1r7Q3UM45 361 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Usp28Q5I043 1051 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Ppp6r1Q7TSI3 856 aa11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Noc3lQ8VI84 807 aaKnown RBP11.77□□□□□ -0.52
Ctc1-202ENSMUST00000116359 Adcy9P51830 1353 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ppfia4B8QI36 1187 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ca8P28651 291 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Csrnp1P59054 583 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 GnpatP98192 678 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 PsapQ61207 557 aaKnown RBP11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Q8C1R3 189 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Usp27Q8CEG8 438 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Hnrnpul1Q8VDM6 859 aaKnown RBP11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Trim66Q924W6 1242 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cabp2Q9JLK4 216 aa11.77□□□□□ -0.53
Ctc1-202ENSMUST00000116359 GclcP97494 637 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Gpt2Q8BGT5 522 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Mmp8O70138 465 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Smarcc1P97496 1104 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Mcm10Q0VBD2 885 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 PpanQ91YU8 470 aaKnown RBP11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Amotl1Q9D4H4 968 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Irx6Q9ER75 438 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Aox1O54754 1333 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Prim1P20664 417 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ddx54Q8K4L0 874 aaKnown RBP11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Knl1Q66JQ7 1612 aa11.76□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Rsph10bE9PYQ0 876 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Rrp1P56183 494 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cct5P80316 541 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cplx2P84086 134 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Exoc5Q3TPX4 708 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Fbxw10Q5SUS0 1030 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Larp1Q6ZQ58 1072 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Adgrb3Q80ZF8 1522 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Prrc2bQ7TPM1 1486 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Dhx8A2A4P0 1244 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Gnai2P08752 355 aaKnown RBP11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Klra3Q64329 266 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Znrd1-asQ8R0E5 213 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 PdclQ9DBX2 301 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Kifap3P70188 793 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Klra9Q2TJJ8 266 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Chpf2Q3UU43 768 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Sgsm2Q80U12 1005 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Map3k11Q80XI6 850 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Calcoco1Q8CGU1 691 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cep57l1Q8VDS7 400 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 KynuQ9CXF0 464 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Klra10Q9R1G6 266 aa11.75□□□□□ -0.53
Ctc1-202ENSMUST00000116359 FanccP50652 591 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Brinp3Q499E0 766 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Jakmip3Q5DTN8 844 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Rassf10Q8BL43 508 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Mageb16Q9CWV4 363 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ehd4Q9EQP2 541 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 DnmbpQ6TXD4 1580 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 GmnnO88513 206 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 FosbP13346 338 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ric8aQ3TIR3 530 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Ccne1Q61457 408 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Top1mtQ8R4U6 593 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 4930519G04RikQ9CPT7 205 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Diaph1O08808 1255 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Chl1P70232 1209 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Cwc27Q3TKY6 469 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Znhit6Q3UFB2 460 aaKnown RBP11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Znf697Q569E7 569 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 TrhQ62361 256 aa11.74□□□□□ -0.53
Ctc1-202ENSMUST00000116359 Atp1a3Q6PIC6 1013 aa11.74□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms