RNA–Protein interactions for RNA: ENSMUST00000108856.8

Col20a1-201, Transcript of Collagen alpha-1(XX) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col20a1, Length 4,489 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1-201ENSMUST00000108856 Usp25P57080 1055 aa12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 RarsQ9D0I9 660 aaKnown RBP12.92□□□□□ -0.34
Col20a1-201ENSMUST00000108856 CemipQ8BI06 1361 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Rbbp8nlA2ABX0 614 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 CebpzP53569 1052 aaKnown RBP12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tmem87bQ8BKU8 555 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Trim11Q99PQ2 467 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Phkg2Q9DB30 406 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Kif3cO35066 796 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Mex3cQ05A36 652 aaKnown RBP12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Gse1Q3U3C9 1213 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Znf219Q6IQX8 726 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Hdac9Q99N13 588 aa12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Ybx3Q9JKB3 361 aaKnown RBP12.91□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Zkscan16A2ALW2 728 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Stim1P70302 685 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tmx3Q8BXZ1 456 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Kdm4cQ8VCD7 1054 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cfap45Q9D9U9 551 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Igsf1Q7TQA1 1317 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Olfr247E9PVJ7 320 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Olfr819K7N727 320 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Zbtb45Q52KG4 520 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Sass6Q80UK7 654 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Tmem143Q8VD26 458 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Cnksr1A2A9K7 700 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Speer4dL7N216 212 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Grm8P47743 908 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Spag5Q7TME2 1165 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Phldb2Q8K1N2 1249 aa12.9□□□□□ -0.34
Col20a1-201ENSMUST00000108856 Znf541Q0GGX2 1363 aa12.9□□□□□ -0.35
Col20a1-201ENSMUST00000108856 CenphQ9QYM8 241 aa12.9□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ercc3P49135 783 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Eif4a1P60843 406 aaKnown RBP12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ncoa4Q5U4H9 625 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Pdcl2Q78Y63 240 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Slc39a6Q8C145 765 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Wasf1Q8R5H6 559 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Lmbr1Q9JIT0 490 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Kdm6aO70546 1401 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Disp3A3KFU9 1347 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Erich4Q3UNU4 136 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Sh3tc1G3X9F6 1346 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Atf5O70191 283 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Pdzrn3Q69ZS0 1063 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Dip2bQ3UH60 1574 aa12.89□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Prdm11A2AGX3 565 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Jakmip2D3YXK0 820 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Prkab2Q6PAM0 271 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Mrpl44Q9CY73 333 aaKnown RBP12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Cwc15Q9JHS9 229 aaKnown RBP12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Foxo3Q9WVH4 672 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Hmg20bQ9Z104 317 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 IghaA0A0A6YXW6 389 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Pet2A2AHY8 747 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Rreb1Q3UH06 1700 aaKnown RBP12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Izumo3A6PWV3 263 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ces1aE9PYP1 563 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Cyp27a1Q9DBG1 533 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Trim30cD3YVI9 513 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Zscan29E9Q5B4 869 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Mdm2P23804 489 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Commd10Q8JZY2 202 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ccdc96Q9CR92 584 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 MicalclQ9D5U9 680 aa12.88□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Abca14E9Q8F8 1683 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Stx1aO35526 288 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Syt1P46096 421 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Atp6v1aP50516 617 aaKnown RBP12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Uri1Q3TLD5 531 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Nup133Q8R0G9 1155 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Srgap1Q91Z69 1062 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Pip4k2aO70172 405 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Tom1l2Q5SRX1 507 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 HmcesQ8R1M0 353 aaKnown RBP12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Rbm19Q8R3C6 952 aaKnown RBP12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Pafah1b1P63005 410 aaKnown RBP12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Nucb2P81117 420 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Cep120Q7TSG1 988 aa12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Mybbp1aQ7TPV4 1344 aaKnown RBP12.87□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Esyt1Q3U7R1 1092 aaKnown RBP12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ccdc150Q8CDI7 1110 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Krt25Q8VCW2 446 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 SympkQ80X82 1284 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Dbndd1Q9CZ00 160 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Rad50P70388 1312 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ncapd2Q8K2Z4 1392 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Tpx2A2APB8 745 aaKnown RBP12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Asic4Q7TNS7 539 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 RgmbQ7TQ33 436 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Tti2Q8BGV4 512 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ano1Q8BHY3 960 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Atg3Q9CPX6 314 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Ndufa8Q9DCJ5 172 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Cep131Q62036 1060 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 U2af1l4Q8BGJ9 220 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Mtmr3Q8K296 1196 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Cep89Q9CZX2 791 aa12.86□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Gm45015A0A140LII9 184 aa12.85□□□□□ -0.35
Col20a1-201ENSMUST00000108856 Gm18336A0A140LIU8 765 aa12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 12.2 ms