RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Uri1Q3TLD5 531 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Arl1P61211 181 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Iffo1Q8BXL9 562 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Exoc1Q8R3S6 894 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Foxo3Q9WVH4 672 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Speer3W4VSP1 261 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ttc21aQ8C0S4 1314 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Sept7O55131 436 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 CrklP47941 303 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ssx2ipQ8VC66 615 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Atp7aQ64430 1491 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 E9QMW4 1145 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Bicc1Q99MQ1 977 aaKnown RBP17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Nop9Q8BMC4 636 aaKnown RBP17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Taok3Q8BYC6 898 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Stoml1Q8CI66 399 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Krt7Q9DCV7 457 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Snapc4Q8BP86 1333 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 CltaO08585 235 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Krt13P08730 437 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ankrd40Q5SUE8 363 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Rtn1Q8K0T0 780 aa17.28■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Caprin2Q05A80 1031 aaKnown RBP17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Tbc1d8Q9Z1A9 1134 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Eno4Q8C042 619 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Arhgef6Q8K4I3 771 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 RalgapbQ8BQZ4 1484 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Prkab2Q6PAM0 271 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Slain2Q8CI08 581 aa17.27■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 AdpgkQ8VDL4 496 aa17.27■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Erlin1Q91X78 346 aa17.27■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 GabpaQ00422 454 aa17.27■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Fam204aQ8C6C7 236 aa17.27■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Kif22Q3V300 660 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Itga6Q61739 1091 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Maats1Q8BRC6 783 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Olfm5Q8BU90 496 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Paip2Q9D6V8 124 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Olfr247E9PVJ7 320 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Olfr819K7N727 320 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Hdhd2Q3UGR5 259 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 MycbpapQ5SUV2 932 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Pm20d1Q8C165 503 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Podxl2Q8CAE9 603 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Prdm11A2AGX3 565 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ercc3P49135 783 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Cdcp1Q5U462 833 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 WaplQ65Z40 1200 aaKnown RBP17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Rab3gap1Q80UJ7 981 aa17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Xpo5Q924C1 1204 aaKnown RBP17.26■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Sbno1Q689Z5 1390 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Znf518aB2RRF6 1478 aaKnown RBP17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Hspa4Q61316 841 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Capn12Q9ER56 720 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 SfpqQ8VIJ6 699 aaKnown RBP17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Krt20Q9D312 431 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ccdc170D3YXL0 722 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Wdr63B2RY71 923 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Cd274Q9EP73 290 aa17.25■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Anapc15-psA0A140T8L6 141 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Pagr1bF6V0H0 108 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Pagr1aQ99L02 253 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Astn2Q80Z10 1352 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Skor1Q8BX46 964 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Atp8b2P98199 1209 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Smco2Q9DA21 347 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 SympkQ80X82 1284 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Fam186bD3Z420 943 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 NpcdF8VQB8 469 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Hoxc9P09633 260 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Gna11P21278 359 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 4921504E06RikQ8CET2 560 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Vmn1r199Q8R280 367 aa17.24■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Exoc8Q6PGF7 716 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 ImpactO55091 318 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Cdca8Q8BHX3 289 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Tdo2P48776 406 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Mex3cQ05A36 652 aaKnown RBP17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Zkscan8Q8BSL0 588 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Srgap1Q91Z69 1062 aa17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Mrps25Q9D125 171 aaKnown RBP17.23■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Gas8Q60779 478 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ccdc93Q7TQK5 629 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Slc39a6Q8C145 765 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 L3mbtl2P59178 703 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ccdc113Q8C5T8 377 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Uso1Q9Z1Z0 959 aaKnown RBP17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ankrd26Q811D2 1581 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Gm12185Q5NCB2 835 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 FanclQ9CR14 375 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Tcerg1lQ3B807 590 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Gas2l2Q5SSG4 860 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ccdc105Q9D4K7 499 aa17.22■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Rad50P70388 1312 aa17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Thoc2B1AZI6 1594 aaKnown RBP17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Glt1d1A4FUP9 346 aa17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Wdr70Q3TWF6 657 aa17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Ift88Q61371 824 aa17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Tmod4Q9JLH8 345 aa17.21■□□□□ 0.35
Ccdc50-203ENSMUST00000100026 Eya1P97767 591 aa17.21■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms