RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 IntuQ059U7 942 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Erc2Q6PH08 957 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 EvplQ9D952 2035 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Heg1E9Q7X6 1337 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Cfap44E9Q5M6 1843 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Brpf1B2RRD7 1212 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Tmem143Q8VD26 458 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Cd248Q91V98 765 aa27.52■■■□□ 2
Scn1b-201ENSMUST00000098548 Neurod6P48986 337 aa27.51■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Plekhf1Q3TB82 279 aa27.51■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Glg1Q61543 1175 aaKnown RBP27.51■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Ppp6r3Q922D4 844 aa27.51■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Atp8a2P98200 1148 aa27.5■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Ppp4r3aQ6P2K6 820 aa27.5■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Q9D2X8 372 aa27.5■■□□□ 1.99
Scn1b-201ENSMUST00000098548 PnnO35691 725 aaKnown RBP27.49■■□□□ 1.99
Scn1b-201ENSMUST00000098548 UvssaQ9D479 717 aa27.49■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Znfx1Q8R151 1909 aaKnown RBP27.49■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Col3a1P08121 1464 aa27.49■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Cyp2c69E9PXC3 491 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Cyp2c40P56657 491 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Atp2b4Q6Q477 1205 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Ppip5k2Q6ZQB6 1129 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 WaslQ91YD9 501 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Hmox1P14901 289 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Nlrp1aQ2LKU9 1182 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Chrna5Q2MKA5 467 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Plbd2Q3TCN2 594 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Slc51aQ8R000 340 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Ptf1aQ9QX98 324 aa27.48■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Timm10P62073 90 aa27.47■■□□□ 1.99
Scn1b-201ENSMUST00000098548 B4galnt4Q766D5 1034 aa27.47■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Tnpo1Q8BFY9 898 aaKnown RBP27.47■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Rnf123Q5XPI3 1314 aa27.47■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Il15P48346 162 aa27.46■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Plcd4Q8K3R3 807 aa27.46■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Cyp2ab1S4R196 498 aa27.46■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Scn11aQ9R053 1765 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Pde8bE9Q4S1 865 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 GabrdP22933 449 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Nedd4P46935 887 aaKnown RBP27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 TrhQ62361 256 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 1700010I14RikQ7TPG0 532 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 RestQ8VIG1 1082 aa27.45■■□□□ 1.99
Scn1b-201ENSMUST00000098548 Tbc1d4Q8BYJ6 1307 aa27.44■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Olfr247E9PVJ7 320 aa27.44■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Olfr819K7N727 320 aa27.44■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Csf1rP09581 977 aa27.44■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Slfn1Q9Z0I7 337 aa27.44■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Casp1P29452 402 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 NfkbibQ60778 359 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Insm1Q63ZV0 521 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 PrimpolQ6P1E7 537 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Sf3a1Q8K4Z5 791 aaKnown RBP27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Osbpl5Q9ER64 874 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Gdf11Q9Z1W4 405 aa27.43■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Btaf1E9QAE3 1848 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Ltn1Q6A009 1767 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 MccE9PWI3 1003 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Atp2b3Q0VF55 1220 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Fam102bQ8BQS4 339 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Rnaseh2aQ9CWY8 301 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Kcnn1Q9EQR3 537 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Tbc1d8Q9Z1A9 1134 aa27.42■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Nup98Q6PFD9 1816 aaKnown RBP27.41■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Rhot2Q8JZN7 620 aa27.41■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Slc14a2Q8R4T9 930 aa27.41■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Fam84aQ9D650 292 aa27.41■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Nphp3Q7TNH6 1325 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 ArsiQ32KI9 573 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Gsdma2Q32M21 443 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Zbtb45Q52KG4 520 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Sh3bp5lQ99LH9 392 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Kdm3aQ6PCM1 1323 aa27.4■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Hsp90b1P08113 802 aaKnown RBP27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Ell2Q3UKU1 639 aa27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Gpr101Q80T62 511 aa27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Slc26a8Q8R0C3 999 aa27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Rbm33Q9CXK9 1231 aaKnown RBP27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Golgb1E9PVZ8 3238 aa27.39■■□□□ 1.98
Scn1b-201ENSMUST00000098548 Tpx2A2APB8 745 aaKnown RBP27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 DbnlQ62418 436 aa27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Best3Q6H1V1 669 aa27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Ptcd1Q8C2E4 695 aaKnown RBP27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Sytl4Q9R0Q1 673 aa27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Ccne2Q9Z238 404 aa27.39■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Atp6v1aP50516 617 aaKnown RBP27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Nol8Q3UHX0 1147 aaKnown RBP27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 GorabQ8BRM2 368 aa27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Ttc5Q99LG4 440 aa27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Fbxo3Q9DC63 480 aa27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Bag3Q9JLV1 577 aaKnown RBP27.38■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Bend4P86174 541 aa27.37■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Spire2Q8K1S6 718 aa27.37■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Phrf1A6H619 1682 aa27.37■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Speer4dL7N216 212 aa27.36■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Znf692Q3U381 531 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Mctp2Q5RJH2 878 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Sptlc3Q8BG54 563 aa27.35■■□□□ 1.97
Scn1b-201ENSMUST00000098548 Ufl1Q8CCJ3 793 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 22,080 RNA–protein pairs in 66.3 ms