RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Ptpn14Q62130 1189 aa11.71□□□□□ -0.53
Col6a3-201ENSMUST00000056925 Trim17Q7TPM3 477 aa11.71□□□□□ -0.53
Col6a3-201ENSMUST00000056925 Ccdc122Q8BVN0 290 aa11.71□□□□□ -0.53
Col6a3-201ENSMUST00000056925 Dtnbp1Q91WZ8 352 aa11.71□□□□□ -0.53
Col6a3-201ENSMUST00000056925 Klhdc4Q921I2 584 aa11.71□□□□□ -0.53
Col6a3-201ENSMUST00000056925 Ints8Q80V86 995 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tmx3Q8BXZ1 456 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Smarca2Q6DIC0 1577 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Vps37dQ810I0 261 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Dnaaf1Q9D2H9 634 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Amotl1Q9D4H4 968 aa11.71□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Mier3Q3UHF3 551 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Atf7Q8R0S1 413 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Nap1l2P51860 460 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ift88Q61371 824 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Asxl1P59598 1514 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Exoc6bA6H5Z3 810 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Gm28043E0CXC2 719 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ppp1r7Q3UM45 361 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ift20Q61025 132 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cgref1Q8R1U2 281 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Atad3Q925I1 591 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 JmyQ9QXM1 983 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Smarca5Q91ZW3 1051 aaKnown RBP11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Pank2Q3U4S0 443 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Taok1Q5F2E8 1001 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Efcab8Q8C9R9 203 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Fam114a2Q8VE88 497 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 CltaO08585 235 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Smg7Q5RJH6 1138 aaKnown RBP11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tmem67Q8BR76 992 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cavin2Q63918 418 aaKnown RBP11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 TchhA0A0B4J1F9 1599 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Krt15Q61414 452 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Paip2bQ91W45 136 aa11.7□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tbc1d2bQ3U0J8 965 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 LnpkQ7TQ95 425 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Slc26a8Q8R0C3 999 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 HdxQ14B70 692 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Abt1Q9QYL7 269 aaKnown RBP11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ercc5P35689 1170 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Psmb7P70195 277 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Nup133Q8R0G9 1155 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 CenppQ9CZ92 286 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 NpcdF8VQB8 469 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Kif2bQ8C0N1 668 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Vps52Q8C754 723 aaKnown RBP11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Krt222Q8CCX5 294 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Pacsin2Q9WVE8 486 aaKnown RBP11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 FerP70451 823 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ttc12Q8BW49 704 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Arhgef6Q8K4I3 771 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Plcb1Q9Z1B3 1216 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tagap1P0CAX8 505 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Dzip1lQ499E4 774 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Fgfr1opQ66JX5 399 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ppp1r12bQ8BG95 976 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Bloc1s4Q8VED2 215 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Hmg20bQ9Z104 317 aa11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cct2P80314 535 aaKnown RBP11.69□□□□□ -0.54
Col6a3-201ENSMUST00000056925 RilpQ5ND29 369 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Mgea5Q9EQQ9 916 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Pcyt1aP49586 367 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Evi5P97366 809 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cyp4f39Q8BGU0 532 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tekt2Q922G7 430 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Tnni2P13412 182 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cage1Q5IR70 849 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 PrimpolQ6P1E7 537 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 GopcQ8BH60 463 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Rbm5Q91YE7 815 aaKnown RBP11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ccdc162pQ0VG85 912 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ccdc157Q5SPX1 718 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Asic3Q6X1Y6 530 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Rcn2Q8BP92 320 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 TatQ8QZR1 454 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 1700017N19RikA0A087WPJ1 469 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Zfp213E9QAW0 468 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 LlphQ9D945 130 aaKnown RBP11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Zkscan4Q5SZT6 480 aa11.68□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Daam1Q8BPM0 1077 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Prpf31Q8CCF0 499 aaKnown RBP11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 NapbP28663 298 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Nsrp1Q5NCR9 542 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ppp1r42Q8R1Z4 357 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Ttc4Q8R3H9 386 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Gpr161B2RPY5 545 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Fam186bD3Z420 943 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Mphosph6Q9D1Q1 161 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Gm21698A0A087WQP8 267 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Gm21663A0A0G2JE01 267 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Gm7347D3YYI9 267 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 5031410I06RikE9Q4E0 267 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Chpf2Q3UU43 768 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Pck1Q9Z2V4 622 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 RpsaP14206 295 aaKnown RBP11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Cfap69Q8BH53 942 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Usp8Q80U87 1080 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Chmp2aQ9DB34 222 aa11.67□□□□□ -0.54
Col6a3-201ENSMUST00000056925 Eef1bO70251 225 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms