RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Rnf180Q3U827 592 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Cdcp1Q5U462 833 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 MarsQ68FL6 902 aaKnown RBP8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Glis3Q6XP49 780 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Slc39a11Q8BWY7 342 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Golim4Q8BXA1 655 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Mtmr2Q9Z2D1 643 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Msh6P54276 1358 aaKnown RBP8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Map9Q3TRR0 646 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Znf496Q5SXI5 585 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 McamQ8R2Y2 648 aaKnown RBP8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ipo4Q8VI75 1082 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Bag3Q9JLV1 577 aaKnown RBP8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Adgrb1Q3UHD1 1582 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ppp1r1bQ60829 194 aa8.33□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ube4aE9Q735 1028 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ubxn2aQ99KJ0 258 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Q9D2X8 372 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Cyp46a1Q9WVK8 500 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Duxf3A0A0N4SV92 674 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Il15P48346 162 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Glis2Q8VDL9 521 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 WaslQ91YD9 501 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Yy1Q00899 414 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Vps54Q5SPW0 977 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pdcl3Q8BVF2 240 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Camkk2Q8C078 588 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Rai14Q9EP71 979 aaKnown RBP8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Bcar3Q9QZK2 820 aa8.32□□□□□ -1.08
Bdnf-201ENSMUST00000053317 SlkO54988 1233 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Spg7Q3ULF4 781 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Tango6Q8C3S2 1079 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 CarsQ9ER72 831 aaKnown RBP8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Q3UJP5 209 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Flt4P35917 1363 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Izumo3A6PWV3 263 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pla2g4fQ50L41 855 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Fam170aQ66LM6 333 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 ParnQ8VDG3 624 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Dpp7Q9ET22 506 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Kcnq5Q9JK45 933 aa8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Mbd3Q9Z2D8 285 aaKnown RBP8.31□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Spef2Q8C9J3 1734 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Polr3dQ91WD1 398 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pcdhb5Q91XZ5 792 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pes1Q9EQ61 584 aaKnown RBP8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Osbpl5Q9ER64 874 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Dpf1Q9QX66 387 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pde8bE9Q4S1 865 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ercc3P49135 783 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Slc7a3P70423 618 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Spata18Q0P557 537 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Chmp4cQ9D7F7 232 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ehd4Q9EQP2 541 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Lgr5Q9Z1P4 907 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Flt1P35969 1333 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Map3k15A2AQW0 1331 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Scn7aB1AYL1 1681 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Arfgef2A2A5R2 1792 aa8.3□□□□□ -1.08
Bdnf-201ENSMUST00000053317 AU019823E9PUQ3 292 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 NogP97466 232 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 AbraQ8BUZ1 375 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 D830030K20RikE9PYQ5 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Gm3043K7N693 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Gm16440K7N6G6 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Gm2244L7N2A3 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Gm3278L7N2D2 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Gm8271L7N2E2 218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Fkbp1aP26883 108 aaKnown RBP8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Cacnb3P54285 484 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 SkilQ60665 675 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ddx31Q6NZQ2 687 aaKnown RBP8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Erc2Q6PH08 957 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Unc5clQ6R653 518 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Myl6bQ8CI43 207 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ptf1aQ9QX98 324 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 InsrrQ9WTL4 1300 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Kank1E9Q238 1360 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Plcb3P51432 1234 aaKnown RBP8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Agtpbp1Q641K1 1218 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Brf1Q8CFK2 676 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 BccipQ9CWI3 316 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 D1Pas1P16381 660 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Tbc1d32Q3URV1 1296 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Pdzrn3Q69ZS0 1063 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Hdac9Q99N13 588 aa8.29□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Myo1bP46735 1107 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Nlrp9aQ66X03 949 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Sf3b3Q921M3 1217 aaKnown RBP8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 KnstrnQ9D9Z1 312 aaKnown RBP8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Slfn1Q9Z0I7 337 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Mast2Q60592 1734 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Map7O88735 730 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Rtkn2Q14B46 604 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Trim27Q62158 513 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 TsksO54887 585 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 GabrdP22933 449 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Plbd2Q3TCN2 594 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Ccdc93Q7TQK5 629 aa8.28□□□□□ -1.08
Bdnf-201ENSMUST00000053317 Sept9Q80UG5 583 aa8.28□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms