RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ktn1Q61595 1327 aaKnown RBP17.26■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ccer1Q9CQL2 403 aa17.26■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ccdc102aQ3TMW1 549 aa17.26■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Tmem132eQ6IEE6 982 aa17.26■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Fbxl16A2RT62 479 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Bcl2l13P59017 434 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Rtel1Q0VGM9 1203 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 AW822073A0A0N4SUK1 652 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Btbd11Q6GQW0 1109 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Amotl1Q9D4H4 968 aa17.25■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Atp10bB1AWN4 1474 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Grm8P47743 908 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ccdc34Q3UI66 367 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Nek11Q8C0Q4 628 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Luzp1Q8R4U7 1068 aaKnown RBP17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Tubb4aQ9D6F9 444 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Gm11983V9GXS8 105 aa17.24■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Tpm4Q6IRU2 248 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Mei4Q8BRM6 389 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Dlg5E9Q9R9 1921 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Col1a2Q01149 1372 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 PtprvP70289 1705 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Uri1Q3TLD5 531 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 PsapQ61207 557 aaKnown RBP17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Vps18Q8R307 973 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 ChmQ9QXG2 665 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Mst1rQ62190 1378 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 CoblQ5NBX1 1337 aaKnown RBP17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Scn7aB1AYL1 1681 aa17.23■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ppfia3P60469 1194 aa17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 HellsQ60848 821 aa17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Cdc37Q61081 379 aa17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Etf1Q8BWY3 437 aaKnown RBP17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Zranb2Q9R020 330 aaKnown RBP17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Tcof1O08784 1320 aaKnown RBP17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Cct2P80314 535 aaKnown RBP17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Mcm6P97311 821 aa17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Lrrfip2Q91WK0 415 aa17.22■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Actn3O88990 900 aaKnown RBP17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Idi1P58044 227 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Irf9Q61179 399 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ccdc158Q8CDI6 1109 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Rassf8Q8CJ96 419 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Fam76aQ922G2 307 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Sh3bp5Q9Z131 463 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Flt4P35917 1363 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Dhx8A2A4P0 1244 aaKnown RBP17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Rbbp8nlA2ABX0 614 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Ica1lQ3TY65 431 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Itga6Q61739 1091 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Nxf7Q80SZ6 620 aaKnown RBP17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Wdr3Q8BHB4 942 aaKnown RBP17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Usp44Q8C2S0 711 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Trim59Q922Y2 403 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Naa16Q9DBB4 864 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 EcsitQ9QZH6 435 aa17.21■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Calcoco2A2A6M5 331 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Amotl2Q8K371 772 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ubap1lG3UW59 384 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Bin1O08539 588 aaKnown RBP17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ccdc82Q6PG04 518 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Lmbr1lQ9D1E5 489 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Mei1Q9D4I2 1268 aa17.2■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Rgs9O54828 675 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Rufy2Q8R4C2 606 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Abcc12Q80WJ6 1366 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Kif3cO35066 796 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Prl7a2O54831 253 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Lrriq3Q14DL3 633 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Abcf1Q6P542 837 aaKnown RBP17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 GckrQ91X44 587 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 BrapQ99MP8 591 aa17.19■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Slit3Q9WVB4 1523 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Neurod6P48986 337 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ptcd1Q8C2E4 695 aaKnown RBP17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Tmx1Q8VBT0 278 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Nop2Q922K7 793 aaKnown RBP17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Telo2Q9DC40 840 aaKnown RBP17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Abcc10Q8R4P9 1501 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 C5P06684 1680 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Gm21985Q6P6P5 1106 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Fsd1Q7TPM6 496 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Hps3Q91VB4 1002 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Acsbg1Q99PU5 721 aa17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Rai14Q9EP71 979 aaKnown RBP17.18■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Rreb1Q3UH06 1700 aaKnown RBP17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Nkx2-3P97334 362 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 DbnlQ62418 436 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Q8CEZ4 452 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Pms1Q8K119 917 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Tada3Q8R0L9 432 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Abcb6Q9DC29 842 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Pes1Q9EQ61 584 aaKnown RBP17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 GmnnO88513 206 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Jarid2Q62315 1234 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Maats1Q8BRC6 783 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Rassf4Q8CB96 322 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Tmem119Q8R138 280 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Stk38Q91VJ4 465 aa17.17■□□□□ 0.34
Ushbp1-201ENSMUST00000049184 Ankrd1Q9CR42 319 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 30.8 ms