RNA–Protein interactions for RNA: ENSMUST00000028769.12

Ptpra-201, Transcript of Receptor-type tyrosine-protein phosphatase alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptpra, Length 3,227 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpra-201ENSMUST00000028769 CtcfQ61164 736 aaKnown RBP20.92■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Cfap58B2RW38 873 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Ankle2Q6P1H6 964 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Aox1O54754 1333 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Oas2E9Q9A9 742 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Hmx1O70218 332 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Gm21985Q6P6P5 1106 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Ddx58Q6Q899 926 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Rps6ka5Q8C050 863 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 AidaQ8C4Q6 305 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Hmg20bQ9Z104 317 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Card6E9PWH2 1175 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Hspd1P63038 573 aaKnown RBP20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Flad1Q8R123 492 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Sil1Q9EPK6 465 aa20.91■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Prdm1Q60636 856 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Tbc1d30Q69ZT9 766 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 4930572O03RikQ8C5Y0 211 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Lrrc2Q8VDB8 371 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Hps3Q91VB4 1002 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Erc1Q99MI1 1120 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Prl3d3A0A0M6L0J6 224 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Csrnp1P59054 583 aa20.9■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Als2Q920R0 1651 aa20.89■□□□□ 0.94
Ptpra-201ENSMUST00000028769 Adamtsl3G3UXC7 1706 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Sipa1l2Q80TE4 1722 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Gm973E9Q295 1059 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Atp2b1G5E829 1220 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 RdxP26043 583 aaKnown RBP20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Tbc1d31Q6NXY1 996 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Rbm33Q9CXK9 1231 aaKnown RBP20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Mrpl44Q9CY73 333 aaKnown RBP20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Cwc25Q9DBF7 416 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ltb4r2Q9JJL9 360 aa20.89■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Nucb2P81117 420 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Cfap157Q0VFX2 523 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ccdc162pQ0VG85 912 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Nol10Q5RJG1 687 aaKnown RBP20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Myl10Q62082 202 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Atg9aQ68FE2 551 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Eif3bQ8JZQ9 803 aaKnown RBP20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Nop14Q8R3N1 860 aaKnown RBP20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Dnajc2P54103 621 aaKnown RBP20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Sass6Q80UK7 654 aa20.88■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ehd2Q8BH64 543 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Inpp5bQ8K337 993 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 U2af2P26369 475 aaKnown RBP20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Kif3aP28741 701 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Usp44Q8C2S0 711 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Nlrp3Q8R4B8 1033 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Rufy2Q8R4C2 606 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Nfat5Q9WV30 1534 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Tbc1d4Q8BYJ6 1307 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 U2af1l4Q8BGJ9 220 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Gpatch3Q8BIY1 525 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Krt25Q8VCW2 446 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 SnrkQ8VDU5 748 aa20.87■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Scn7aB1AYL1 1681 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Zbtb40Q6PCS8 1258 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Lmod1Q8BVA4 595 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Alg3Q8K2A8 438 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Sept12Q9D451 317 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Hoxa7P02830 229 aa20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Golph3lQ8R088 285 aaKnown RBP20.86■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Gm29094F6Q785 221 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 SdsQ8VBT2 327 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 MthfsQ9D110 203 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Dusp10Q9ESS0 483 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Simc1E9Q6E9 1354 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 TnksQ6PFX9 1320 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 VeztQ3ZK22 780 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ccne2Q9Z238 404 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Mon2Q80TL7 1715 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Smim5Q8BT42 78 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Stk38Q91VJ4 465 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Terf2ipQ91VL8 393 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Clic4Q9QYB1 253 aa20.85■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Mtx1P47802 317 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Tmc2Q8R4P4 888 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Vmn2r23E9PXI5 849 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Pcdh10E9PXQ7 1057 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Slc4a1P04919 929 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Zfp91Q62511 572 aa20.84■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ccdc112A0AUP1 442 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Card10P58660 1021 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Atp2b3Q0VF55 1220 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Gas2l3Q3UWW6 683 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 NfkbibQ60778 359 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Hmgn5Q9JL35 406 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Atp8b3Q6UQ17 1335 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Dnajc25A2ALW5 357 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Sec62Q8BU14 398 aaKnown RBP20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Ints5Q8CHT3 1018 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Cap2Q9CYT6 476 aa20.83■□□□□ 0.93
Ptpra-201ENSMUST00000028769 Eya2O08575 532 aa20.83■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Ap5z1Q3U829 807 aa20.83■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Acap3Q6NXL5 833 aa20.83■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Smc4Q8CG47 1286 aa20.83■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Smg7Q5RJH6 1138 aaKnown RBP20.82■□□□□ 0.92
Ptpra-201ENSMUST00000028769 Pramel3A2AHA7 463 aa20.82■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms