RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Zmym1Q3TJB1 983 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Wdr93Q402B2 695 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Q66JV7 365 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Aldh8a1Q8BH00 487 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Sh2b1Q91ZM2 756 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 AvenQ9D9K3 342 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Def6Q8C2K1 630 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ccdc83Q9D4V3 305 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Elp1Q7TT37 1333 aaKnown RBP13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Atf5O70191 283 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ddx49Q4FZF3 480 aaKnown RBP13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Col14a1Q80X19 1797 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ankrd35E9Q9D8 996 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cyp2d11P24457 504 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Eif4a1P60843 406 aaKnown RBP13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Smarcc2Q6PDG5 1213 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Prune1Q8BIW1 454 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Mrps27Q8BK72 415 aaKnown RBP13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Nup88Q8CEC0 753 aaKnown RBP13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Hmgn5Q9JL35 406 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Znf568E9PYI1 671 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Chmp7Q8R1T1 451 aa13.39□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Evi5P97366 809 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Kcnb1Q03717 857 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ccdc57Q6PHN1 1016 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Zfp446Q8C9M8 523 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Acsbg1Q99PU5 721 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Coro7Q9D2V7 922 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 AppP12023 770 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 NefhP19246 1090 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ppp1r37Q8BKR5 712 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Bcl9Q9D219 1425 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Mctp1E9PV86 951 aa13.38□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Igsf1Q7TQA1 1317 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Tlr7P58681 1050 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Slc5a4aQ9ET37 656 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Klra5Q60652 266 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Erc2Q6PH08 957 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 TkfcQ8VC30 578 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Q9CYI0 393 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 SetQ9EQU5 289 aaKnown RBP13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 PdcQ9QW08 244 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Dpf1Q9QX66 387 aa13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ahnak2E9PYB0 1738 aaKnown RBP13.37□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cplx2P84086 134 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Usp48Q3V0C5 1052 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Trim25Q61510 634 aaKnown RBP13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cbx8Q9QXV1 362 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Msh6P54276 1358 aaKnown RBP13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ptpdc1Q6NZK8 747 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cfap100Q80VN0 613 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Nfu1Q9QZ23 255 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 PtprvP70289 1705 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Kdm6aO70546 1401 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Pde11aP0C1Q2 933 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Jarid2Q62315 1234 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Pof1bQ8K4L4 587 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 TnmdQ9EP64 317 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 ChmQ9QXG2 665 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Scn7aB1AYL1 1681 aa13.36□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Map3k2Q61083 619 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Efcab8Q8C9R9 203 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Eif3cQ8R1B4 911 aaKnown RBP13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 GckrQ91X44 587 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ndufa8Q9DCJ5 172 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Elmsan1E9Q2I4 1089 aaKnown RBP13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Mcm5P49718 733 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Tmem165P52875 323 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Rad17Q6NXW6 688 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Phf23Q8BSN5 401 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Epc1Q8C9X6 813 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cep89Q9CZX2 791 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Stx6Q9JKK1 255 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Zeb2Q9R0G7 1215 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Zfp804bA0A0G2JGH6 1343 aa13.35□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Hspa2P17156 633 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 CrklP47941 303 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Atp6v1dP57746 247 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Cnnm1Q0GA42 951 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 CoilQ5SU73 570 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Kcna6Q61923 529 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Drc7Q6V3W6 876 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Dnaaf2Q8BPI1 814 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Flad1Q8R123 492 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Eif2ak3Q9Z2B5 1114 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 TnrQ8BYI9 1358 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 1700006A11RikB9EHI3 544 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Hnrnph1O35737 449 aaKnown RBP13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Mmp8O70138 465 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Sstr3P30935 428 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 GclcP97494 637 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Atp8b2P98199 1209 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 ThemisQ8BGW0 636 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Evc2Q8K1G2 1220 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Fam76aQ922G2 307 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Slit2Q9R1B9 1521 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Exoc3l2D3YUP5 789 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Ccdc33Q3ULW6 985 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Wdr60Q8C761 999 aa13.34□□□□□ -0.27
Sdc1-201ENSMUST00000020911 Pdzd9Q9D9M4 266 aa13.34□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms