RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Sptlc3Q8BG54 563 aa17.97■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Osbpl5Q9ER64 874 aa17.97■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Nup188Q6ZQH8 1759 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Hmox1P14901 289 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Glg1Q61543 1175 aaKnown RBP17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Kiaa0753Q6A000 959 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Pdzph1Q8BGR1 1238 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Cyp2ab1S4R196 498 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 Scn11aQ9R053 1765 aa17.96■□□□□ 0.47
Ercc1-201ENSMUST00000003645 ZyxQ62523 564 aa17.95■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Rhbdl3P58873 404 aa17.94■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Insm1Q63ZV0 521 aa17.94■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Krt25Q8VCW2 446 aa17.94■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Ppil4Q9CXG3 492 aaKnown RBP17.94■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Taf1dQ9D4V4 322 aa17.94■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Setdb1O88974 1307 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Magea6O89010 325 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Rad23bP54728 416 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Magea3Q6T340 320 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Abtb2Q7TQI7 1024 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Ufl1Q8CCJ3 793 aaKnown RBP17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Ppm1fQ8CGA0 452 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Slc14a2Q8R4T9 930 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Noc3lQ8VI84 807 aaKnown RBP17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 CenppQ9CZ92 286 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 ParvgQ9ERD8 331 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Usp21Q9QZL6 566 aa17.93■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Magea1O89006 320 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Magea5O89009 320 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Casp1P29452 402 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Unc5clQ6R653 518 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Rhot2Q8JZN7 620 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 RestQ8VIG1 1082 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Magea2Q9R2A2 320 aa17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Znfx1Q8R151 1909 aaKnown RBP17.92■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Nolc1E9Q5C9 702 aaKnown RBP17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Vps54Q5SPW0 977 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Nlrp9aQ66X03 949 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Camkk2Q8C078 588 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Gm38655A0A286YDK6 273 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Cyp3a57D3YYZ0 503 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Nkx1-2P42580 305 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Fam160b2Q80YR2 744 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Hirip3Q8BLH7 601 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Brf1Q8CFK2 676 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Riok1Q922Q2 567 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Rdm1Q9CQK3 281 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Fam84aQ9D650 292 aa17.91■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Nup98Q6PFD9 1816 aaKnown RBP17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Olfr247E9PVJ7 320 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Olfr819K7N727 320 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Prl3d1P18121 224 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 HdlbpQ8VDJ3 1268 aaKnown RBP17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Mrps5Q99N87 432 aaKnown RBP17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Il1rapl2Q9ERS6 686 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Ptf1aQ9QX98 324 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Nek4Q9Z1J2 792 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 Gdf11Q9Z1W4 405 aa17.9■□□□□ 0.46
Ercc1-201ENSMUST00000003645 TnksQ6PFX9 1320 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Rbbp8nlA2ABX0 614 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ankrd63A2ARS0 390 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ubxn2bQ0KL01 331 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 4930567H17RikQ3V0K5 233 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Pde3bQ61409 1100 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Mrpl12Q9DB15 201 aaKnown RBP17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ube3bQ9ES34 1070 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Irs4Q9Z0Y7 1216 aa17.89■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Pdia3P27773 505 aaKnown RBP17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 CalcaP70160 136 aa17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Nol8Q3UHX0 1147 aaKnown RBP17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 EspnlQ3UYR4 1005 aa17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 PrimpolQ6P1E7 537 aa17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 WdpcpQ8C456 722 aa17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Cd248Q91V98 765 aa17.88■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Chrna5Q2MKA5 467 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ell2Q3UKU1 639 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ccdc51Q3URS9 406 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Tbc1d9Q3UYK3 1264 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Nme8Q715T0 586 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ttc5Q99LG4 440 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Q9D2X8 372 aa17.87■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Anapc15-psA0A140T8L6 141 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Izumo3A6PWV3 263 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Vsig10D3YX43 558 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Csf1rP09581 977 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Atp6v1aP50516 617 aaKnown RBP17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Prune1Q8BIW1 454 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Stk3Q9JI10 497 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Myoz2Q9JJW5 264 aa17.86■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Ccdc183A2AJB1 534 aa17.85■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Il17raQ60943 864 aa17.85■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Sept9Q80UG5 583 aa17.85■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Liat1Q810M6 228 aa17.85■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Golim4Q8BXA1 655 aa17.85■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Mtcl1Q3UHU5 1945 aa17.84■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Anp32aO35381 247 aa17.84■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Klrk1O54709 232 aa17.84■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Gm5592Q3V0A6 857 aa17.84■□□□□ 0.45
Ercc1-201ENSMUST00000003645 EvplQ9D952 2035 aa17.84■□□□□ 0.45
Ercc1-201ENSMUST00000003645 Carmil3Q3UFQ8 1375 aa17.83■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 27.3 ms