RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 STEAP1Q9UHE8 339 aa15.15■□□□□ 0.02
PHGDH-223ENST00000641597 ATXN7L1Q9ULK2 861 aaPredicted RBP15.15■□□□□ 0.02
PHGDH-223ENST00000641597 POM121CA8CG34 1229 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 SLC25A12O75746 678 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 OPN1LWP04000 364 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 CSF2RBP32927 897 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 H2BFSP57053 126 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 SLC17A1Q14916 467 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 COL13A1Q5TAT6 717 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-223ENST00000641597 DCAF12L2Q5VW00 463 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 CORO6Q6QEF8 472 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 ZNF227Q86WZ6 799 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 ADAMTS18Q8TE60 1221 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 CYYR1Q96J86 154 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 ARL5BQ96KC2 179 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 CMTM3Q96MX0 182 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 OR8B4Q96RC9 309 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 GINS4Q9BRT9 223 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 VN1R1Q9GZP7 353 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 GLTPQ9NZD2 209 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TMED7-TICAM2A0A0A6YYA0 188 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 IGKV1D-43A0A0B4J1Z2 117 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 DCDC2BA2VCK2 349 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 GGT3PA6NGU5 568 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 LILRA5A6NI73 299 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TMEM212A6NML5 194 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 I3L521 148 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TSPAN2O60636 221 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 NDUFB6O95139 128 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 CD3DP04234 171 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 MAPK3P27361 379 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-223ENST00000641597 PSMA6P60900 246 aaKnown RBP15.14■□□□□ 0.01
PHGDH-223ENST00000641597 METTL11BQ5VVY1 283 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 HLA-DQA1Q5Y7H0 255 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 OLFML2AQ68BL7 652 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 MRPL39Q9NYK5 338 aaKnown RBP15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TAS2R4Q9NYW5 299 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 COA3Q9Y2R0 106 aaPredicted RBP15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TMED7Q9Y3B3 224 aa15.14■□□□□ 0.01
PHGDH-223ENST00000641597 TRAV36DV7A0A075B6V5 113 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 XRCC3O43542 346 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 ELFN2Q5R3F8 820 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 ABHD6Q9BV23 337 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 IGLV1-36A0A0B4J1U3 117 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 TCRBV16S1A1N1A0A5B0 115 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 BLACEA4D250 179 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 M0R233 179 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 OR6A2O95222 327 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 ARL4DP49703 201 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 AP3S2P59780 193 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 RPL27P61353 136 aaKnown RBP15.13■□□□□ 0.01
PHGDH-223ENST00000641597 EGR3Q06889 387 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 COL28A1Q2UY09 1125 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 SYT13Q7L8C5 426 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 COMMD7Q86VX2 200 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 CCDC28AQ8IWP9 274 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 ZNF519Q8TB69 540 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 STK35Q8TDR2 534 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 C17orf50Q8WW18 174 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 FAM3DQ96BQ1 224 aa15.13■□□□□ 0.01
PHGDH-223ENST00000641597 CLEC4MQ9H2X3 399 aaPredicted RBP15.13■□□□□ 0.01
PHGDH-223ENST00000641597 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 H7C417 338 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 SOX1O00570 391 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 EIF1AYO14602 144 aaKnown RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 RBBP9O75884 186 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 GP1BBP13224 206 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 GTF2F2P13984 249 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 SPOCK1Q08629 439 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 EIF2B1Q14232 305 aaKnown RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 ELAVL1Q15717 326 aaKnown RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 C1orf140Q5VVS0 124 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 ZNF626Q68DY1 528 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 SDR16C5Q8N3Y7 309 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 OR1J4Q8NGS1 313 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 C8orf44Q96CB5 159 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 DPYSL5Q9BPU6 564 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 FOXQ1Q9C009 403 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 ATG5Q9H1Y0 275 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 AKAP7Q9P0M2 348 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MTFP1Q9UDX5 166 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 EMC9Q9Y3B6 208 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 LRP12Q9Y561 859 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 CPAMD8Q8IZJ3 1885 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 TMEM272A0A1B0GTI8 110 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 ALG1L2C9J202 215 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 IGFBP4P22692 258 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MOGAT2Q3SYC2 334 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 C14orf28Q4W4Y0 310 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 EMC4Q5J8M3 183 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 FAM69BQ5VUD6 431 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 ANKRD16Q6P6B7 361 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MAMDC2Q7Z304 686 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 KRT77Q7Z794 578 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 RTN4RL2Q86UN3 420 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MUC20Q8N307 709 aaPredicted RBP15.12■□□□□ 0.01
PHGDH-223ENST00000641597 SFXN2Q96NB2 322 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MED29Q9NX70 200 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 VDAC3Q9Y277 283 aa15.12■□□□□ 0.01
PHGDH-223ENST00000641597 MRPS18BQ9Y676 258 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms