RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 CD79AP11912 226 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 FDXRP22570 491 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 DCTDP32321 178 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 TFPI2P48307 235 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 CBFBQ13951 182 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 GFI1BQ5VTD9 330 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 PSAPL1Q6NUJ1 521 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 ACOT1Q86TX2 421 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 COMMD2Q86X83 199 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 ASB11Q8WXH4 323 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 KCTD13Q8WZ19 329 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 SMPDL3BQ92485 455 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 HAS2Q92819 552 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 SLCO5A1Q9H2Y9 848 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 ADAP2Q9NPF8 381 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 PARP11Q9NR21 331 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 FTSJ1Q9UET6 329 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 LSM7Q9UK45 103 aaKnown RBP5.27□□□□□ -1.57
SCN1A-216ENST00000637968 GPR52Q9Y2T5 361 aa5.27□□□□□ -1.57
SCN1A-216ENST00000637968 DICER1Q9UPY3 1922 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 NFKBIEO00221 500 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 NME2P1O60361 137 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 TGFB1P01137 390 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SERPINA7P05543 415 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PGA3P0DJD8 388 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR12D1P0DN82 309 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SNHG28P0DPA3 235 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PCSK1P29120 753 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 GNRHRP30968 328 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PRSS3P35030 304 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SOX18P35713 384 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 GABRA4P48169 554 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 FLT3LGP49771 235 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 RAB11AP62491 216 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CNN3Q15417 329 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 DCAF4L1Q3SXM0 396 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 EIPR1Q53HC9 387 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 FBLN7Q53RD9 439 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 C1orf194Q5T5A4 169 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ZNF66Q6ZN08 573 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 FCRLAQ7L513 359 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 RGL4Q8IZJ4 473 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 LRRC52Q8N7C0 313 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR4S1Q8NGB4 309 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR4A4PQ8NGN8 299 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR11L1Q8NGX0 322 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ABHD4Q8TB40 342 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 GPX8Q8TED1 209 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 C12orf42Q96LP6 360 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR7D2Q96RA2 312 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ATOH8Q96SQ7 321 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PDCD2LQ9BRP1 358 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 MSL2Q9HCI7 577 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 LRFN1Q9P244 771 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 WRAP73Q9P2S5 460 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 KLK11Q9UBX7 282 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 NEU3Q9UQ49 428 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 AHDC1Q5TGY3 1603 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 M0R296 226 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 MANBAO00462 879 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 TRAF3IP2O43734 574 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 GLCEO94923 617 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CH25HO95992 272 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR8U9P0C7N5 309 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 BRS3P32247 399 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CAPZBP47756 277 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ATP1B3P54709 279 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 RIPPLY3P57055 190 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 GPR18Q14330 331 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 RAB30Q15771 203 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PRRT3Q5FWE3 981 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CST9LP1Q5W188 147 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 RPUSD3Q6P087 351 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 NIPAL3Q6P499 406 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 FAM220AQ7Z4H9 259 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ZNF679Q8IYX0 411 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 PNLDC1Q8NA58 520 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SIDT2Q8NBJ9 832 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 OR4D6Q8NGJ1 314 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 UTP23Q9BRU9 249 aaKnown RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SAMD10Q9BYL1 202 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SYNPO2LQ9H987 977 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SIX4Q9UIU6 781 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 VAX2Q9UIW0 290 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 USP3Q9Y6I4 520 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 A0A087WUJ7 227 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 IQCF5A8MTL0 148 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CLDN34H7C241 214 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 J3QR89 54 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 CCL22O00626 93 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 LCATP04180 440 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 MELTFP08582 738 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 STAG3L2P0CL84 134 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 HKR1P10072 659 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ELNP15502 786 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 HLA-GP17693 338 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 TAS2R41P59536 307 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 ACOT6Q3I5F7 207 aaPredicted RBP5.26□□□□□ -1.57
SCN1A-216ENST00000637968 SLC25A52Q3SY17 297 aa5.26□□□□□ -1.57
SCN1A-216ENST00000637968 MIDNQ504T8 468 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms