RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 STYXL1Q9Y6J8 313 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CHD7Q9P2D1 2997 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SBF1O95248 1867 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 A0A1B0GVI7 797 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MAP1LC3B2A6NCE7 125 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 YJEFN3A6XGL0 299 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 INMT-MINDY4F8WBC2 141 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 TGFBR3LH3BV60 316 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 J3KTA2 159 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PCDH7O60245 1069 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CSO75390 466 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 GABRA1P14867 456 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ELNP15502 786 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 NTF3P20783 257 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 AGXTP21549 392 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 HTR1EP28566 365 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 TNFSF8P32971 234 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 EVX1P49640 407 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 GSK3BP49841 420 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 TAS2R43P59537 309 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 RPL7AP62424 266 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SSBP2P81877 361 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 UBE2V1Q13404 147 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 GAB1Q13480 694 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 UGCGQ16739 394 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 IQCJQ1A5X6 159 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PYDC2Q56P42 97 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SPANXN3Q5MJ09 141 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FAM182AQ5T1J6 154 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF684Q5T5D7 378 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 RTL6Q6ICC9 239 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 GOLGA7Q7Z5G4 137 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PTOV1Q86YD1 416 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 LRRC52Q8N7C0 313 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SDR9C7Q8NEX9 313 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CADM4Q8NFZ8 388 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 NETO1Q8TDF5 533 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FBLIM1Q8WUP2 373 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ST8SIA1Q92185 356 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 HPDLQ96IR7 371 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 CNTNAP3BQ96NU0 1288 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MCEEQ96PE7 176 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC30A3Q99726 388 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 INPP5KQ9BT40 448 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 C1QTNF2Q9BXJ5 285 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 MAP1LC3BQ9GZQ8 125 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ATG10Q9H0Y0 220 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 LPAR5Q9H1C0 372 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 C20orf85Q9H1P6 137 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SRD5A3Q9H8P0 318 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 EXOSC4Q9NPD3 245 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ADARB2Q9NS39 739 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 LYRM2Q9NU23 88 aaPredicted RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SIDT1Q9NXL6 827 aaKnown RBP3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SLC17A6Q9P2U8 582 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 HSPB7Q9UBY9 170 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 ZNF391Q9UJN7 358 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 SERTAD3Q9UJW9 196 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 FBXW11Q9UKB1 542 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PIGLQ9Y2B2 252 aa3.56□□□□□ -1.84
R3HDM1-220ENST00000628915 PTPRJQ12913 1337 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 KCNE1BA0A087WTH5 132 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 A0A087X1B8 175 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TBC1D3BA6NDS4 549 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 RNF223E7ERA6 249 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 F5H768 121 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MKRN2OSH3BPM6 223 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 B4GALT5O43286 388 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SEMA4FO95754 770 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SRFP11831 508 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ADRA2CP18825 462 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 AGAP20933 346 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 ITPKBP27987 946 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TM4SF1P30408 202 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CD68P34810 354 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MAP2K3P46734 347 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 GABRA2P47869 451 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CDX1P47902 265 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CAV2P51636 162 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 KEAP1Q14145 624 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 OPCMLQ14982 345 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CPSF6Q16630 551 aaKnown RBP eCLIP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CDKN3Q16667 212 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CTU2Q2VPK5 515 aaKnown RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PYCR3Q53H96 274 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 SOWAHCQ53LP3 525 aaPredicted RBP3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 EMC4Q5J8M3 183 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 MFSD14BQ5SR56 506 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TREML2Q5T2D2 321 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TBC1D3GQ6DHY5 549 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 CCDC144NLQ6NUI1 221 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 PAMR1Q6UXH9 720 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 TOMM20LQ6UXN7 152 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 DLK2Q6UY11 383 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.55□□□□□ -1.847e-11■■■■■ 33.9
R3HDM1-220ENST00000628915 OLIG3Q7RTU3 272 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 LGI3Q8N145 548 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 STPG2Q8N412 459 aa3.55□□□□□ -1.84
R3HDM1-220ENST00000628915 C15orf54Q8N8G6 183 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms