RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 CBARPQ8N350 705 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 UBAC2Q8NBM4 344 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZBTB44Q8NCP5 570 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 BCL7CQ8WUZ0 217 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 RAB24Q969Q5 203 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MRPL38Q96DV4 380 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PDCD1LG2Q9BQ51 273 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ELOVL3Q9HB03 270 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MMP26Q9NRE1 261 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TRAPPC2LQ9UL33 140 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM129A0AVI4 362 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF814B7Z6K7 855 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SOX15O60248 233 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 RPLP1P05386 114 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 RRASP10301 218 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CTSAP10619 480 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 LAMP1P11279 417 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NME1P15531 152 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ADPRHP54922 357 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 KRTDAPP60985 99 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 SH3BP2P78314 561 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 JAG1P78504 1218 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CLPPQ16740 277 aaPredicted RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 CTU2Q2VPK5 515 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 VHLLQ6RSH7 139 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM104Q8NE00 496 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ABHD4Q8TB40 342 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 NRG4Q8WWG1 115 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 MAP6Q96JE9 813 aa6.63□□□□□ -1.35
COLCA1-205ENST00000620864 PCDHGA9Q9Y5G4 932 aaKnown RBP6.63□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF860A6NHJ4 632 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 K7ERQ8 282 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 BCL2L11O43521 198 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MTHFD2P13995 350 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 VWA1Q6PCB0 445 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 NPSR1Q6W5P4 371 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CLDN19Q8N6F1 224 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 OR51B6Q9H340 312 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MRPS28Q9Y2Q9 187 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 SYT5O00445 386 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 BMI1P35226 326 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 BCL6P41182 706 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PDE7AQ13946 482 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 VRK3Q8IV63 474 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 BAP18Q8IXM2 172 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PRR18Q8N4B5 295 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 FIBINQ8TAL6 211 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TSACCQ96A04 125 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MRGPRX2Q96LB1 330 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 HSD3B7Q9H2F3 369 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CNIH4Q9P003 139 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 FAM208AQ9UK61 1670 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 G3V2L1 256 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 GALR3O60755 368 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 GLAP06280 429 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PTHLHP12272 177 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 APEHP13798 732 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 DRD1P21728 446 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MTCP1P56278 107 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PJVKQ0ZLH3 352 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 HLXQ14774 488 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 RTL8BQ17RB0 113 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 DEFB134Q4QY38 66 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 H2BFWTQ7Z2G1 175 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PRSS42Q7Z5A4 293 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 NAXDQ8IW45 347 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 NAGSQ8N159 534 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 LMNTD1Q8N9Z9 388 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF680Q8NEM1 530 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 FUBP1Q96AE4 644 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 ZNF443Q9Y2A4 671 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CRYM-AS1A6NIL9 109 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TCAPO15273 167 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 RNGTTO60942 597 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 SMIM17P0DL12 118 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MS4A2Q01362 244 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 ETV3LQ6ZN32 361 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 EMG1Q92979 244 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 ISL2Q96A47 359 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 MUCL1Q96DR8 90 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TMEM43Q9BTV4 400 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 DPH7Q9BTV6 452 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 KCNK12Q9HB15 430 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CSAG2Q9Y5P2 127 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 RP1L1Q8IWN7 2480 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 M0R1X1 148 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 SULT2B1O00204 365 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 PLRG1O43660 514 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 IGFBP1P08833 259 aaPredicted RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 DBHP09172 617 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CD79AP11912 226 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 CLDN20P56880 219 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 UBE2MP61081 183 aaKnown RBP6.62□□□□□ -1.35
COLCA1-205ENST00000620864 NR0B2Q15466 257 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 FOXN4Q96NZ1 517 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TPPP3Q9BW30 176 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 TXLNGYQ9BZA5 131 aa6.62□□□□□ -1.35
COLCA1-205ENST00000620864 FKRPQ9H9S5 495 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms