RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 KLF9Q13886 244 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 ACKR1Q16570 336 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 PLCZ1Q86YW0 608 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 OR2G2Q8NGZ5 317 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 GPR119Q8TDV5 335 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 NUDT22Q9BRQ3 303 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 GTPBP2Q9BX10 602 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 WWTR1Q9GZV5 400 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 LAT2Q9GZY6 243 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 EPHA6Q9UF33 1036 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 ATXN7L1Q9ULK2 861 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 MOKQ9UQ07 419 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 RALGAPA1Q6GYQ0 2036 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 SUSD5O60279 629 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 MPZL1O95297 269 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 BCKDHBP21953 392 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 DCTDP32321 178 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 CSF2RBP32927 897 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC25A1P53007 311 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 RNF4P78317 190 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 TNK1Q13470 666 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 GSG1Q2KHT4 349 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC6A19Q695T7 634 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 PRSS35Q8N3Z0 413 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 OR11H4Q8NGC9 324 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 PCNPQ8WW12 178 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 FCAMRQ8WWV6 532 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 DAZLQ92904 295 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 KLHL15Q96M94 604 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 TINAGL1Q9GZM7 467 aaPredicted RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 ADAM19Q9H013 955 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 COMMD4Q9H0A8 199 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 C20orf85Q9H1P6 137 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 ELOVL3Q9HB03 270 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 HRASLSQ9HDD0 168 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 GLRX2Q9NS18 164 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 FGF21Q9NSA1 209 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 MYEF2Q9P2K5 600 aaKnown RBP12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 MMACHCQ9Y4U1 282 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 MUC3AQ02505 3323 aa12.54□□□□□ -0.4
CACNA1C-231ENST00000616390 TMED7-TICAM2A0A0A6YYA0 188 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ERVH48-1M5A8F1 160 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 PIAS2O75928 621 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 OPN1LWP04000 364 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 EDN3P14138 238 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 SLC25A25Q6KCM7 469 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 PWWP2BQ6NUJ5 590 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 TDHQ8IZJ6 230 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 HYLS1Q96M11 299 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 GON7Q9BXV9 100 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 VDAC3Q9Y277 283 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 TMED7Q9Y3B3 224 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 IGKV3D-11A0A0A0MRZ8 115 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 TCRBV16S1A1N1A0A5B0 115 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 LINC00587B1AMM8 73 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ARPC1BO15143 372 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 KRT33AO76009 404 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ANXA3P12429 323 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 HLA-DOBP13765 273 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ALOX5APP20292 161 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 CCR9P51686 369 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ART1P52961 327 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ISXQ2M1V0 245 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 YOD1Q5VVQ6 348 aaPredicted RBP12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 LUZP2Q86TE4 346 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 GLB1L2Q8IW92 636 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 OR51D1Q8NGF3 324 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 FOXJ3Q9UPW0 622 aa12.53□□□□□ -0.4
CACNA1C-231ENST00000616390 A0A1B0GTQ1 180 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 SHISA8B8ZZ34 492 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 H3BMH7 237 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 BGLAPP02818 100 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 PGCP20142 388 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 NXPH1P58417 271 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 ADAM8P78325 824 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 PLXDC1Q8IUK5 500 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 CCDC74AQ96AQ1 378 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 OR1F2PQ96R84 312 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 TAS2R10Q9NYW0 307 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 FREM2Q5SZK8 3169 aa12.52□□□□□ -0.4
CACNA1C-231ENST00000616390 TRAV36DV7A0A075B6V5 113 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 DUX1O43812 170 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 ABHD16AO95870 558 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 SMAD2Q15796 467 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 WDR38Q5JTN6 314 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 SLC22A10Q63ZE4 541 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 DND1Q8IYX4 353 aaKnown RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 SLC25A45Q8N413 288 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 C9orf62Q8N4C0 152 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 PHF7Q9BWX1 381 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 KLF2Q9Y5W3 355 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 NUP210LQ5VU65 1888 aa12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 TNRC18O15417 2968 aaPredicted RBP12.52□□□□□ -0.41
CACNA1C-231ENST00000616390 PHF3Q92576 2039 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms