RNA–Protein interactions for RNA: ENST00000604929.1

TUBB4B-202, Transcript of tubulin beta 4B class IVb, humanhuman

TSL 1 (best)

Gene TUBB4B, Length 2,035 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4B-202ENST00000604929 IL1AP01583 271 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 BMP4P12644 408 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 ZNF823P16415 610 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 CALRP27797 417 aaKnown RBP17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 MEOX1P50221 254 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 RAC3P60763 192 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 SRYQ05066 204 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 ACSM3Q53FZ2 586 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 THEM4Q5T1C6 240 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 CREB3L2Q70SY1 520 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 FAM220AQ7Z4H9 259 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 LINC00346Q8IVM7 164 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 SLC26A10Q8NG04 563 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 OR6X1Q8NH79 312 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 ROBO4Q8WZ75 1007 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 HTRA1Q92743 480 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 RNF166Q96A37 237 aaPredicted RBP17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 SLC25A46Q96AG3 418 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 SMAD5Q99717 465 aaKnown RBP17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 SEC61A2Q9H9S3 476 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 QPCTLQ9NXS2 382 aa17.09■□□□□ 0.33
TUBB4B-202ENST00000604929 CENPBD1B2RD01 187 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 CLDN25C9JDP6 229 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 NPIPA2E9PIF3 369 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 NPIPA3F8WFD2 350 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 NME2P1O60361 137 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 UPK3AO75631 287 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 CD46P15529 392 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 SPINK2P20155 84 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 NME2P22392 152 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 PTGS2P35354 604 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 SOX8P57073 446 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 EIF2B1Q14232 305 aaKnown RBP17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 DEFB109BQ30KR1 87 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 ESPNLQ6ZVH7 1005 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 KCTD20Q7Z5Y7 419 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 TMEM251Q8N6I4 163 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 OR10D3Q8NH80 312 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 HAS2Q92819 552 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 COQ7Q99807 217 aa17.08■□□□□ 0.33
TUBB4B-202ENST00000604929 PHF3Q92576 2039 aaKnown RBP17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 KLRC4-KLRK1H3BQV0 150 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 SMAD9O15198 467 aaKnown RBP17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 CDAP32320 146 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 AGFG1P52594 562 aaKnown RBP17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 NHLH1Q02575 133 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 EGR3Q06889 387 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 SLC17A1Q14916 467 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 INAQ16352 499 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 CCDC58Q4VC31 144 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 SLC18B1Q6NT16 456 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 CORO6Q6QEF8 472 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 NOXO1Q8NFA2 376 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 OR9K2Q8NGE7 335 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 MCHR2Q969V1 340 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 MNTQ99583 582 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 KCNN2Q9H2S1 579 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 ELOVL3Q9HB03 270 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 AKIP1Q9NQ31 210 aa17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 KLF13Q9Y2Y9 288 aaPredicted RBP17.08■□□□□ 0.32
TUBB4B-202ENST00000604929 A0A1W2PPL8 197 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 VAMP5O95183 116 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 ABHD16AO95870 558 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 QDPRP09417 244 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 CD53P19397 219 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 MAGEB1P43366 347 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 ODF4Q2M2E3 257 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 LRFN4Q6PJG9 635 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 GLB1L2Q8IW92 636 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 MS4A15Q8N5U1 240 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 ZNF845Q96IR2 970 aaPredicted RBP17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 ABHD6Q9BV23 337 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 SLC6A15Q9H2J7 730 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 FRRS1LQ9P0K9 344 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 POLHQ9Y253 713 aa17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 PRRC2CQ9Y520 2896 aaKnown RBP17.07■□□□□ 0.32
TUBB4B-202ENST00000604929 RGS5O15539 181 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 SULT1C4O75897 302 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 ZFPL1O95159 310 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 WNT11O96014 354 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 HPNP05981 417 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 S100A5P33763 92 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 PPIAP62937 165 aaKnown RBP17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 ZNF766Q5HY98 468 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 OR2V1Q8NHB1 315 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 C11orf40Q8WZ69 217 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 MROQ9BYG7 248 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 HMG20AQ9NP66 347 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 ZNF407Q9C0G0 2248 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 H3BSH0 61 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 PHYHO14832 338 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 ITGB2P05107 769 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 GAAP10253 952 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 GALP22466 123 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 RPS11P62280 158 aaKnown RBP eCLIP17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 TRAM1Q15629 374 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 RSPO4Q2I0M5 234 aaPredicted RBP17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 C16orf87Q6PH81 154 aa17.06■□□□□ 0.32
TUBB4B-202ENST00000604929 PLXDC2Q6UX71 529 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms