RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 RNF121Q9H920 327 aa20.53■□□□□ 0.88
SSX2IP-209ENST00000603677 SEC61A2Q9H9S3 476 aa20.53■□□□□ 0.88
SSX2IP-209ENST00000603677 NRIP3Q9NQ35 241 aa20.53■□□□□ 0.88
SSX2IP-209ENST00000603677 GDF2Q9UK05 429 aaPredicted RBP20.53■□□□□ 0.88
SSX2IP-209ENST00000603677 NDUFS8O00217 210 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 SSX4O60224 188 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 SLC25A16P16260 332 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 PCSK6P29122 969 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 THBS4P35443 961 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 GPR4P46093 362 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 PCBD1P61457 104 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 MYBPC1Q00872 1141 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 DPY19L2P2Q6ZN68 376 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 FAM122BQ7Z309 247 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 FAM46AQ96IP4 442 aaKnown RBP20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 TSPAN32Q96QS1 320 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 SH3GL3Q99963 347 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 RAB1BQ9H0U4 201 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 TMCC3Q9ULS5 477 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 UGT2A1Q9Y4X1 527 aa20.52■□□□□ 0.88
SSX2IP-209ENST00000603677 MMP7P09237 267 aaPredicted RBP20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 SDHAP31040 664 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 TOP3AQ13472 1001 aaPredicted RBP20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 GK3PQ14409 553 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 RAB39AQ14964 217 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 TBC1D28Q2M2D7 210 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 LCN8Q6JVE9 175 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 ADCK1Q86TW2 530 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 ZDHHC21Q8IVQ6 265 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 CIARTQ8N365 385 aaPredicted RBP20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 SLC30A7Q8NEW0 376 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 NEU4Q8WWR8 484 aaPredicted RBP20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 MS4A3Q96HJ5 214 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 DOK1Q99704 481 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 CCNB1IP1Q9NPC3 277 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 ZFHX3Q15911 3703 aa20.51■□□□□ 0.87
SSX2IP-209ENST00000603677 NIPBLQ6KC79 2804 aaeCLIP20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 TRBV4-1A0A0J9YWV2 114 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 IMPA2O14732 288 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 NDUFS7O75251 213 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 STAMBPO95630 424 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 CST2P09228 141 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 T-ENOLP0DO92 83 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 RAD52P43351 418 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 RPS6KA3P51812 740 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 SPIBQ01892 262 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 SMARCD3Q6STE5 483 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 DHFR2Q86XF0 187 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 ZNF584Q8IVC4 421 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 ALDH16A1Q8IZ83 802 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 MRPL24Q96A35 216 aaKnown RBP20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 NABP1Q96AH0 204 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 RSRC1Q96IZ7 334 aaKnown RBP20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 ZNF570Q96NI8 536 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 BCL2L14Q9BZR8 327 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 TRIM15Q9C019 465 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 MS4A5Q9H3V2 200 aa20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 GSX1Q9H4S2 264 aaPredicted RBP20.5■□□□□ 0.87
SSX2IP-209ENST00000603677 NSD1Q96L73 2696 aaPredicted RBP20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 PRSS37A4D1T9 235 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 UNC119BA6NIH7 251 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 SLC2A10O95528 541 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 TXNDC12O95881 172 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 FPR3P25089 353 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 MSX2P35548 267 aaPredicted RBP20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 MAGEA2P43356 314 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 SELENOVP59797 346 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 ERVK-25P63136 954 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 KRT80Q6KB66 452 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 VHLLQ6RSH7 139 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 ZNF540Q8NDQ6 660 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 FGFBP3Q8TAT2 258 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 BCAS4Q8TDM0 211 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 FAM168AQ92567 244 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 ASB9Q96DX5 294 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 SNX18Q96RF0 628 aa20.49■□□□□ 0.87
SSX2IP-209ENST00000603677 IDH3BO43837 385 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 DIRAS1O95057 198 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 MSR1P21757 451 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 RRM2P31350 389 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 APLNRP35414 380 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 SEC23BQ15437 767 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 RPL13AP3Q6NVV1 102 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 C1orf94Q6P1W5 598 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 TRPM8Q7Z2W7 1104 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 IGFN1Q86VF2 1251 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 OR52J3Q8NH60 311 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 CDH20Q9HBT6 801 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 TAS2R1Q9NYW7 299 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 GPR160Q9UJ42 338 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 TIMM10BQ9Y5J6 103 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 NF1P21359 2839 aa20.48■□□□□ 0.87
SSX2IP-209ENST00000603677 CSPG4Q6UVK1 2322 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 TMEM129A0AVI4 362 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 C12orf71A8MTZ7 269 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 ARPC3O15145 178 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 SYNGR3O43761 229 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 LY6G6DO95868 133 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 PATE4P0C8F1 98 aa20.47■□□□□ 0.87
SSX2IP-209ENST00000603677 ZNF26P17031 533 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms