RNA–Protein interactions for RNA: ENST00000596121.5

VRK3-210, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 983 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-210ENST00000596121 SDHAP31040 664 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 FABP6P51161 128 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 ZNF84P51523 738 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 TSPAN31Q12999 210 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 KRR1Q13601 381 aaKnown RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 SGCAQ16586 387 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 MICAQ29983 383 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 THEM4Q5T1C6 240 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 FAM205BPQ63HN1 556 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 UGT2A3Q6UWM9 527 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 HDDC2Q7Z4H3 204 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 SPATA24Q86W54 205 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 TGIF2LYQ8IUE0 185 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 PAQR4Q8N4S7 273 aaPredicted RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 CPEB3Q8NE35 698 aaKnown RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 OR8D4Q8NGM9 314 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 FANK1Q8TC84 345 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 FBXO17Q96EF6 278 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 ZNF570Q96NI8 536 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 TMUB1Q9BVT8 246 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 PLA2G12AQ9BZM1 189 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 SIAEQ9HAT2 523 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 STX18Q9P2W9 335 aaKnown RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 GDF2Q9UK05 429 aaPredicted RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 SAMHD1Q9Y3Z3 626 aaKnown RBP9.65□□□□□ -0.86
VRK3-210ENST00000596121 MED13LQ71F56 2210 aa9.65□□□□□ -0.86
VRK3-210ENST00000596121 DCTN6O00399 190 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 CCNB2O95067 398 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 UBL3O95164 117 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 MPZL1O95297 269 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 GPANK1O95872 356 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 IGHV4-39P01824 125 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 CRYAAP02489 173 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 SERPINA5P05154 406 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 CCL2P13500 99 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 PAX7P23759 505 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 LAP3P28838 519 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 APOBEC3AP31941 199 aaPredicted RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 THBS4P35443 961 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ENDOGQ14249 297 aaKnown RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 ADIPOQQ15848 244 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 SWI5Q1ZZU3 235 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 NRN1LQ496H8 165 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 Q5PR19 223 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ZNF362Q5T0B9 420 aaPredicted RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 GPR139Q6DWJ6 353 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ZNF544Q6NX49 715 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ZNF620Q6ZNG0 422 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ASRGL1Q7L266 308 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 SLC16A14Q7RTX9 510 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 HS3ST5Q8IZT8 346 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 DEPDC4Q8N2C3 294 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 MUC15Q8N387 334 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 AQP11Q8NBQ7 271 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 PAPD5Q8NDF8 572 aaKnown RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 UTP4Q969X6 686 aaKnown RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 TSSK2Q96PF2 358 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 ERMAPQ96PL5 475 aaPredicted RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 RBP7Q96R05 134 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 GRIP2Q9C0E4 1043 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 SYT4Q9H2B2 425 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 LRMDAQ9H2I8 198 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 REEP1Q9H902 201 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 EMC7Q9NPA0 242 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 DLL4Q9NR61 685 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 CA10Q9NS85 328 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 CBLN4Q9NTU7 201 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 VSX1Q9NZR4 365 aaPredicted RBP9.64□□□□□ -0.87
VRK3-210ENST00000596121 ARFGEF3Q5TH69 2177 aa9.64□□□□□ -0.87
VRK3-210ENST00000596121 A0A1W2PPL8 197 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 TMEM129A0AVI4 362 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 BHLHE40O14503 412 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 ARPC3O15145 178 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 GPRIN2O60269 458 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 FKBP6O75344 327 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 ATP5HO75947 161 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 FARS2O95363 451 aaKnown RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 RAB36O95755 333 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CST1P01037 141 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 OR4A8P0C604 315 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 APEHP13798 732 aaKnown RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 HIST1H1CP16403 213 aaKnown RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 ZNF32P17041 273 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 NR4A1P22736 598 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 IFNGR2P38484 337 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 PSG4Q00888 419 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CCNIQ14094 377 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CLEC12AQ5QGZ9 265 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 AGAP6Q5VW22 663 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 VHLLQ6RSH7 139 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 RASSF6Q6ZTQ3 369 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 YTHDF3Q7Z739 585 aaKnown RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 FBXL14Q8N1E6 418 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 CIARTQ8N365 385 aaPredicted RBP9.63□□□□□ -0.87
VRK3-210ENST00000596121 NUP37Q8NFH4 326 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 OR10G2Q8NGC3 310 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 OR4K13Q8NH42 304 aa9.63□□□□□ -0.87
VRK3-210ENST00000596121 AKR7LQ8NHP1 331 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms