RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 AQP11Q8NBQ7 271 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 FNDC8Q8TC99 324 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 FBXW5Q969U6 566 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 DUS3LQ96G46 650 aaKnown RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF570Q96NI8 536 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 DDOQ99489 341 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 DGCR6LQ9BY27 220 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 PLA2G12AQ9BZM1 189 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 DENND2DQ9H6A0 471 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 EGLN3Q9H6Z9 239 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 SIAEQ9HAT2 523 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 VSX1Q9NZR4 365 aaPredicted RBP13.29□□□□□ -0.28
TRIM47-206ENST00000592942 PLCE1Q9P212 2302 aa13.29□□□□□ -0.28
TRIM47-206ENST00000592942 ATP6V1G2-DDX39BF2Z307 99 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 OVOL3O00110 214 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 SOCS2O14508 198 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF35P13682 527 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 CTLA4P16410 223 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 CAPZA2P47755 286 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 ZNF84P51523 738 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 ART1P52961 327 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 CDH11P55287 796 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 DBPQ10586 325 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-206ENST00000592942 KRR1Q13601 381 aaKnown RBP13.28□□□□□ -0.28
TRIM47-206ENST00000592942 GK3PQ14409 553 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 FAM27BQ5VT28 67 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 CD300LDQ6UXZ3 194 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 RASSF6Q6ZTQ3 369 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 KRTAP1-3Q8IUG1 177 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 HS3ST5Q8IZT8 346 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 OR8D4Q8NGM9 314 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 FANK1Q8TC84 345 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 PIGTQ969N2 578 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 FBXO17Q96EF6 278 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 ERMAPQ96PL5 475 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-206ENST00000592942 FEVQ99581 238 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 NIPSNAP1Q9BPW8 284 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 DHRS9Q9BPW9 319 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 MOV10Q9HCE1 1003 aaKnown RBP13.28□□□□□ -0.28
TRIM47-206ENST00000592942 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
TRIM47-206ENST00000592942 LAMP3Q9UQV4 416 aa13.28□□□□□ -0.28
TRIM47-206ENST00000592942 USF3Q68DE3 2245 aa13.27□□□□□ -0.28
TRIM47-206ENST00000592942 IGHV2OR16-5A0A0B4J2B6 119 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 DCTN6O00399 190 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 BHLHE40O14503 412 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 MGRN1O60291 552 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 TIPRLO75663 272 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 UBL3O95164 117 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 PAX1P15863 534 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 HIST1H1CP16403 213 aaKnown RBP13.27□□□□□ -0.29
TRIM47-206ENST00000592942 NPR2P20594 1047 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 SLC6A6P31641 620 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 PTDSS1P48651 473 aaKnown RBP13.27□□□□□ -0.29
TRIM47-206ENST00000592942 RPS6KA3P51812 740 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 RAB39AQ14964 217 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 DTX2Q86UW9 622 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 C10orf67Q8IYJ2 551 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 LRRC18Q8N456 261 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 OR10G2Q8NGC3 310 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 GIPC3Q8TF64 312 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 GTPBP3Q969Y2 492 aaKnown RBP13.27□□□□□ -0.29
TRIM47-206ENST00000592942 CCL19Q99731 98 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 TRAF4Q9BUZ4 470 aaPredicted RBP13.27□□□□□ -0.29
TRIM47-206ENST00000592942 GRIP2Q9C0E4 1043 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 NUAK2Q9H093 628 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 SYT4Q9H2B2 425 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 ZNF701Q9NV72 531 aaPredicted RBP13.27□□□□□ -0.29
TRIM47-206ENST00000592942 DNAJB9Q9UBS3 223 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 REV1Q9UBZ9 1251 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 ATP23Q9Y6H3 246 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 CDH10Q9Y6N8 788 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 HIVEP1P15822 2718 aa13.27□□□□□ -0.29
TRIM47-206ENST00000592942 ARRDC5A6NEK1 342 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 XKRYO14609 159 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 IDH3BO43837 385 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 FARS2O95363 451 aaKnown RBP13.26□□□□□ -0.29
TRIM47-206ENST00000592942 CRYAAP02489 173 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 SERPINA5P05154 406 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 NR2C1P13056 603 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 PRKACGP22612 351 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 LAP3P28838 519 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 TTKP33981 857 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 NPRL3Q12980 569 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
TRIM47-206ENST00000592942 ITPR3Q14573 2671 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 KPNB1Q14974 876 aaKnown RBP13.26□□□□□ -0.29
TRIM47-206ENST00000592942 SGCAQ16586 387 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 MST1LQ2TV78 715 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 C11orf71Q6IPW1 123 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 UGT2A3Q6UWM9 527 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 SPNS3Q6ZMD2 512 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 SLC16A14Q7RTX9 510 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 DEPDC4Q8N2C3 294 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 IL17RDQ8NFM7 739 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 NANOS1Q8WY41 292 aaKnown RBP13.26□□□□□ -0.29
TRIM47-206ENST00000592942 TSSK2Q96PF2 358 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 NMNAT3Q96T66 252 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 IFT27Q9BW83 186 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 NDEL1Q9GZM8 345 aa13.26□□□□□ -0.29
TRIM47-206ENST00000592942 ARMC1Q9NVT9 282 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms