RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 MSX2P35548 267 aaPredicted RBP17.34■□□□□ 0.37
CIRBP-239ENST00000592467 NR4A2P43354 598 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 FXYD6P3P58550 94 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 CD47Q08722 323 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 SLC36A2Q495M3 483 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 TMEM53Q6P2H8 277 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 CYP4Z1Q86W10 505 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 ARIH2OSQ8N7S6 290 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 NSMAFQ92636 917 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 FOXN4Q96NZ1 517 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 LRRC37BQ96QE4 947 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 ADAM18Q9Y3Q7 739 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 SPEF1Q9Y4P9 236 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 JMJD1CQ15652 2540 aa17.34■□□□□ 0.37
CIRBP-239ENST00000592467 TRBV4-1A0A0J9YWV2 114 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 LOC390937A0A1W2PQ73 354 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 SH3PXD2BA1X283 911 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 VSTM5A8MXK1 200 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 TLX2O43763 284 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-239ENST00000592467 SNAP29O95721 258 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 SCG5P05408 212 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 TCN1P20061 433 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-239ENST00000592467 ERVK-25P63136 954 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 PPP2R2BQ00005 443 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 ZBED5Q49AG3 693 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 THEM4Q5T1C6 240 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 FAM27BQ5VT28 67 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 FAM205BPQ63HN1 556 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 FAM46AQ96IP4 442 aaKnown RBP17.33■□□□□ 0.36
CIRBP-239ENST00000592467 CDRT15Q96T59 188 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 GPA33Q99795 319 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 SYT3Q9BQG1 590 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 RAB1BQ9H0U4 201 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 RNF121Q9H920 327 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 MYOZ1Q9NP98 299 aaPredicted RBP17.33■□□□□ 0.36
CIRBP-239ENST00000592467 SIGLEC7Q9Y286 467 aa17.33■□□□□ 0.36
CIRBP-239ENST00000592467 STAMBPO95630 424 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 CD14P08571 375 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 ADRA2AP08913 450 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 IGHV4-31P0DP07 118 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 ZNF32P17041 273 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 USF1P22415 310 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-239ENST00000592467 GALK2Q01415 458 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 MESTQ5EB52 335 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 PABPC1L2AQ5JQF8 200 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 THSD4Q6ZMP0 1018 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 FNDC8Q8TC99 324 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 NEU4Q8WWR8 484 aaPredicted RBP17.32■□□□□ 0.36
CIRBP-239ENST00000592467 PYURFQ96I23 114 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 Q96M85 177 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 C1orf198Q9H425 327 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 MAGEL2Q9UJ55 1249 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 FZR1Q9UM11 496 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 TMEM5Q9Y2B1 443 aa17.32■□□□□ 0.36
CIRBP-239ENST00000592467 IGHV4-61A0A0C4DH41 118 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 A6NIZ1 184 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 H7C1C5 153 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 ARPC2O15144 300 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 SYNGR3O43761 229 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 DCTN3O75935 186 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 TP53P04637 393 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 FAM157BP0CG42 384 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 GIFP27352 417 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 APEX1P27695 318 aaKnown RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 RAP1BP61224 184 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 ERVS71-1P61550 626 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 RPS23P62266 143 aaKnown RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 LCN6P62502 163 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 RAP1AP62834 184 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 PSG4Q00888 419 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 SAMD4BQ5PRF9 694 aaKnown RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 C6orf52Q5T4I8 152 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 GKAP1Q5VSY0 366 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 POM121L2Q96KW2 1035 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 RBP7Q96R05 134 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 GPX7Q96SL4 187 aaPredicted RBP17.31■□□□□ 0.36
CIRBP-239ENST00000592467 PIMREGQ9BSJ6 248 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 TPK1Q9H3S4 243 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 DYNLRB1Q9NP97 96 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 NRIP3Q9NQ35 241 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 V9GYQ6 96 aa17.31■□□□□ 0.36
CIRBP-239ENST00000592467 MALRD1Q5VYJ5 2156 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 IGLV3-9A0A075B6K5 115 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 LOC100509620A0A075B734 347 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 SLC22A23A1A5C7 686 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 NR2C1P13056 603 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 DAOP14920 347 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 ZNF250P15622 560 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 LAP3P28838 519 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 ALDH3B1P43353 468 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 ENDOGQ14249 297 aaKnown RBP17.3■□□□□ 0.36
CIRBP-239ENST00000592467 KRT72Q14CN4 511 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 MAD2L1BPQ15013 274 aaPredicted RBP17.3■□□□□ 0.36
CIRBP-239ENST00000592467 SGCAQ16586 387 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 FGD3Q5JSP0 725 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 DEFB107AQ8IZN7 70 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 ZNF786Q8N393 782 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 CCT8L2Q96SF2 557 aa17.3■□□□□ 0.36
CIRBP-239ENST00000592467 BPESC1Q9GZL8 116 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms