RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 ENTHD1Q8IYW4 607 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF540Q8NDQ6 660 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OR9Q2Q8NGE9 314 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OR13F1Q8NGS4 319 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OR52N5Q8NH56 324 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 CNIH3Q8TBE1 160 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 RNF217Q8TC41 542 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 RORBQ92753 470 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 FBXW5Q969U6 566 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 MUL1Q969V5 352 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 LRR1Q96L50 414 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 Q96MT0 163 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 DOK1Q99704 481 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 CCL19Q99731 98 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 TMUB1Q9BVT8 246 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 GSX2Q9BZM3 304 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 CCDC90BQ9GZT6 254 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 OBP2BQ9NPH6 170 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 DLL4Q9NR61 685 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 MAN2C1Q9NTJ4 1040 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF701Q9NV72 531 aaPredicted RBP7.55□□□□□ -1.2
ATG4D-202ENST00000585437 TAS2R5Q9NYW4 299 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ARID1AO14497 2285 aa7.55□□□□□ -1.2
ATG4D-202ENST00000585437 ACANP16112 2415 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TRBV4-1A0A0J9YWV2 114 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 A0A1W2PR80 420 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 SH3PXD2BA1X283 911 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ZAR1LA6NP61 321 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF99A8MXY4 864 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 PTGES3LE9PB15 166 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 OVOL3O00110 214 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ABCD4O14678 606 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 FFAR1O14842 300 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 SLC43A1O75387 559 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 CH25HO95992 272 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 FUT4P22083 530 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 CD40P25942 277 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 FMO3P31513 532 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 CRISP1P54107 249 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 RPS4XP62701 263 aaKnown RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 SPOCK1Q08629 439 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 PIN1Q13526 163 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TRAM2Q15035 370 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TBCEQ15813 527 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 PGGHGQ32M88 737 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 C3orf36Q3SXR2 165 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TBRG1Q3YBR2 411 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 HIKESHIQ53FT3 197 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 PHYHD1Q5SRE7 291 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 XAF1Q6GPH4 301 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF770Q6IQ21 691 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ANKRD16Q6P6B7 361 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TMEM108Q6UXF1 575 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 CD300LDQ6UXZ3 194 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 DTX2Q86UW9 622 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 C20orf196Q8IYI0 205 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 FAM169BQ8N8A8 192 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 RHOXF1Q8NHV9 184 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TMEM255BQ8WV15 326 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TMEM239Q8WW34 195 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TRUB1Q8WWH5 349 aaKnown RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 AKAP1Q92667 903 aaKnown RBP eCLIP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 NEUROG1Q92886 237 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 GTPBP3Q969Y2 492 aaKnown RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TMIGD2Q96BF3 282 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF837Q96EG3 531 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 RADILQ96JH8 1075 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 ADAD1Q96M93 576 aaKnown RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 HS6ST2Q96MM7 605 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 NIPSNAP1Q9BPW8 284 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 TEX12Q9BXU0 123 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 GPR35Q9HC97 309 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 NANSQ9NR45 359 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 C20orf141Q9NUB4 165 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 MED29Q9NX70 200 aa7.54□□□□□ -1.2
ATG4D-202ENST00000585437 CRNNQ9UBG3 495 aaPredicted RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 WARS2Q9UGM6 360 aaKnown RBP7.54□□□□□ -1.2
ATG4D-202ENST00000585437 SLC35F4A4IF30 521 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 HTR3EA5X5Y0 456 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF503-AS2A6NEH8 195 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 EFCAB10A6NFE3 127 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 NPIPB13A6NJU9 1138 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 NPIPB4C9JG80 1138 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 KPNA4O00629 521 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 XPNPEP2O43895 674 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 GASTP01350 101 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 IGKV3-15P01624 115 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 IGLV1-44P01699 117 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 SOD3P08294 240 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 HTR1AP08908 422 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 ADORA3P0DMS8 318 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 HOXB1P14653 301 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 EPHA2P29317 976 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 ZNF83P51522 516 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 PRPS1P60891 318 aa7.53□□□□□ -1.2
ATG4D-202ENST00000585437 RPL18Q07020 188 aaKnown RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 FOXD4Q12950 439 aaPredicted RBP7.53□□□□□ -1.2
ATG4D-202ENST00000585437 C1DQ13901 141 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms